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Detailed information on CNT30120072


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-161

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516063Citrus clementinaJuglans regia57.2767.4184.68666forward
CNT30701196Citrus clementinaQuercus lobata59.1678.2784.88688forward
CNT30279021Citrus clementinaChenopodium quinoa66.0458.985.03768forward
CNT30727227Citrus clementinaCorchorus capsularis58.9959.785.86686forward
CNT3069547Citrus clementinaQuercus suber58.9999.2883.82686forward
CNT30379426Citrus clementinaManihot esculenta69.6569.9584.94810forward
CNT30709517Citrus clementinaGlycine max65.5282.0283.6762forward
CNT30156153Citrus clementinaPistacia vera69.3970.0590.95807forward
CNT30635990Citrus clementinaCapsicum annuum69.1338.7884.2804forward
CNT3096790Citrus clementinaSolanum tuberosum67.8487.8684.41789forward
CNT3089455Citrus clementinaVigna radiata64.6661.8484.31752forward
CNT30511508Citrus clementinaSolanum lycopersicum67.0759.6383.97780forward
CNT30311185Citrus clementinaCamelina sativa66.2158.1683.12770forward
CNT30605652Citrus clementinaGossypium raimondii69.1381.5484.2804forward
CNT30642981Citrus clementinaCannabis sativa65.1867.5683.91758forward
CNT3032610Citrus clementinaTheobroma cacao61.3988.2683.47714forward
CNT3024139Citrus clementinaPopulus trichocarpa69.375.0585.11806forward
CNT30174657Citrus clementinaVigna angularis85.7361.0582.55997forward
CNT30111690Citrus clementinaFicus carica66.2969.1583.66771forward
CNT30334102Citrus clementinaCynara cardunculus67.3335.5382.63783forward
CNT30724005Citrus clementinaLupinus angustifolius68.7961.9782.12800forward

Expression of CNT30120072

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVFPVSVFTKICIPPRRRSTKWRVDSFWML*

>peptide 2 (53 aa)
MTKLRNLHGDGAQDAEWTPSGCCNQQESFHPQVVFQQRSTSAGLGESPPYPGS*

>peptide 3 (79 aa)
MQSGLLLDVVISKSPSILKLFSSKDQPLLVWGNPLLILDLSLHIVNCVRTLNLQCDGFPSECLHKNLHTTTETKHQMEG*

>peptide 4 (40 aa)
MVSELSTSRVIVFPVRVFTKICIPPRRRRTKWRVDSFWML*

>peptide 5 (44 aa)
MPSLSCILALTLSIVSELSTSKVIVLPVRVFTKICMPPLRRRTK*

Sequence

>CNT30120072
GTTAGTGGGACCATATCAATATCTTAGAAACAGAGTTCAACTACCACAACCAAAATAAACTTCAAATAGTTATTTAAGCCATTTCACCAATAGCAAGCAA
ACATTAACCAAGACAAACCGAAGCAAATAAGACACACACACACCCAGATGACCAAACTCAGAAACCTCCACGGAGACGGAGCACAAGATGCAGAGTGGAC
TCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCCTCAAGTTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCCTCCTTATCCT
GGATCTTAGCCTTCACATTGTCAATTGTGTCCGAACTCTCAACCTCCAATGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCATACCACCACG
GAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGT
TGATCAGGTGGGATGCCCTCCTTGTCCTGTATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTCTTACCAGTCAGGG
TTTTCACAAAAATCTGCATGCCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGTCCATCCTCTAG
TTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCACC
TCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCATACCACCACGGAGACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTAT
AATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGGTTGATTCCTTCTGGATATTATAGTCAGCGAGTGTG
CGACCATCCTCGAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGT
CGGAGCTTTCAACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCACAAAGATTTGCATCT