« Back to Citrus clementina search


Detailed information on CNT30119978


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-133

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-113

Expression of CNT30119978

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MQSGLLLDVVISKSPSILKLFSSKDQPLLVWGNPLLILDLSLHIVNCVRTLNLQCDGFPSECLHKNLHTTTETKHQMEG*

>peptide 2 (44 aa)
MPSLSCILALTLSIVSELSTSKVIVLPVRVFTKICMPPLRRRTK*

>peptide 3 (53 aa)
MTKLRNLHGDGAQDAEWTPSGCCNQQESFHPQVVFQQRSTSAGLGESPPYPGS*

>peptide 4 (29 aa)
MSLCWSGLTPSGCYNQQVCDHPRAVYRQR*

>peptide 5 (30 aa)
MVFPVSVFTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30119978
GTTAGTGGGACCATATCAATATCTTAGAAACAGAGTTCAACTACCACAACCAAAATAAACTTCAAATAGTTATTTAAGCCATTTCACCAATAGCAAGCAA
ACATTAACCAAGACAAACCGAAGCAAATAAGACACACACACACCCAGATGACCAAACTCAGAAACCTCCACGGAGACGGAGCACAAGATGCAGAGTGGAC
TCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCCTCAAGTTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCCTCCTTATCCT
GGATCTTAGCCTTCACATTGTCAATTGTGTCCGAACTCTCAACCTCCAATGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCATACCACCACG
GAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGT
TGATCAGGTGGGATGCCCTCCTTGTCCTGTATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTCTTACCAGTCAGGG
TTTTCACAAAAATCTGCATGCCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGTCCATCCTCTAG
TTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCGGCAA
AGATAAGCCTCTGTTGGTCTGGGTTGATTCCTTCTGGATATTATAGTCAGCGAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAGATAAGCCTCTGC
TGATCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTGCCGGTGAGAG
TTTTCACAAAGATTTGCATCT