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Detailed information on CNT30119778


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223492Citrus clementinaHordeum vulgare9.622.4396.3983reverse complement

Expression of CNT30119778

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MDYLRQMSFRWYSPSGLLMGKPGLLLAGDSISQV*

>peptide 2 (30 aa)
MLLTSSDIVGGLCCREFWAYRTSWQLNFRC*

>peptide 3 (38 aa)
MCSSFCGSNLLYAMAVELILCIMLQISSTTQCFTYLPI*

Sequence

>CNT30119778
GATCTCTGTCTTCTTTCTCTCATTCAAAACCGTGCATGAGACTTTCATCTCGCACGGCTCCTAAGTGATAAAAGTAAAGAAGAACTCATCTTGAAGAGTA
CCAAGAGGTTTGCGGAGAATCTTAGAGAAATCATGCTGCCGAAGATGTCTCATTTGTGATGCTTCTGACATCGAGTGATATAGTTGGTGGCCTTTGTTGT
AGAGAATTTTGGGCTTATCGAACTTCATGGCAATTGAATTTTAGATGTTAATACTTAGGAATGGATGTGTAGTAGTTTTTGTGGTTCCAACTTGTTGTAT
GCCATGGCCGTCGAACTTATTTTATGTATAATGTTACAAATTTCAAGTACCACTCAATGCTTTACATATCTTCCAATTTAGATGGTGTACTAAGTTAATC
TTGTTTGTCTGTGTTCAAACATTTTCTTTTAATTTTCTGAACGAATGATTATGGACGTCTTCTAATTTCATTTCTGAATATTGATACTTTTTTTCCGAAC
ACTAAGGACTGCAAAGAGGAAGCCCTTCAGCTGCATAAGTTGTATAAGCCTTAGTTATTTGACAATTGATGTTTTTGGCACAACTAGGAACATATAAGTT
GAGGAGATCAATGTGAGAGCACCAAAGAAAAAAAAGCTGGAATTTATCAAACAACAGAAATGGATTATTTGCGTCAGATGTCGTTCCGTTGGTACTCACC
TTCTGGTTTATTAATGGGAAAACCAGGCTTGCTGCTTGCTGGCGATTCCATTTCCCAGGTGTGAGGTACGTCTCTCTTCTTGATATGCAGTGCTGCCCTT
CTTCTGCTGTCAACTTTCACGGGCTGTAGAGGGCGAGGATAAAGGAAATCAGTAGGGAAAAAGTA