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Detailed information on CNT30119671


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021612Citrus clementinaCitrullus lanatus3.2422.6691.346forward
CNT30627257Citrus clementinaDaucus carota3.2422.8991.346forward

Expression of CNT30119671

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLEIEIKMIKLYAFGYTMSVVTVLPRCQAAPQRS*

>peptide 2 (62 aa)
MRLLSCFTPTQIQSDFRTRLSVAASQCWSFCFQQSCEFVHAFSVSSFLLYKPAISAIFGLSI*

>peptide 3 (29 aa)
MLKKFRCSLLKINNLNSLHVFVMTCLWIL*

>peptide 4 (34 aa)
MNKFQVHLENTELVDFVSGPYCFAILRKLIQFLV*

Sequence

>CNT30119671
ATAATAATCCGCTAGATAGATTTACAAGCGAAGTGCGTTTCATTTTGTGATGCTTGAAATCGAAATCAAGATGATAAAATTATATGCTTTTGGGTACACA
ATGTCTGTAGTGACCGTGCTTCCTCGTTGCCAAGCTGCGCCTCAGAGATCTTAGTCTATGCCAGAATGAGCTTCCTATTTGGGAGGTCACATACTTGTTA
GTTGAAACCGTGGAGTGTGGATTTGGAATTATGGTAAAATCTCTCATGGTATAGATGAATAAATTTCAAGTGCATCTTGAAAATACAGAGCTTGTTGATT
TTGTTTCGGGTCCCTACTGTTTTGCAATTTTAAGAAAGTTGATTCAGTTTCTTGTTTAATTACTTAATATGTAGTGTGAGCTGGACATCACGTTCCATTT
GGAGAGGCCCGTTTTATAGTGCAGGAGAAGGTCATGGATGGGTGTATGGCAGAGCCACGCAAGTCAACCATTCTGACACCCCAATAAAACTGATGGAGAA
AACATCTTGAAATAGTTGTAAGGGCTCCAGGGTTTTGTGAGAGATTCATAACAGGTGAACATAATTGGATGAGGCTGCTGTCCTGTTTTACGCCTACCCA
AATTCAGTCTGATTTCAGGACTAGACTGAGTGTGGCTGCAAGCCAATGCTGGAGTTTCTGCTTTCAACAGAGCTGTGAGTTTGTCCATGCTTTTTCTGTG
TCATCTTTCTTATTATATAAACCTGCAATATCTGCTATTTTTGGGTTAAGCATCTAGAGCTCATCGAACTTAAATCTGCCTTTTCCGAGTGTCTTTGCTC
TATTTCTTCACCACTTGCCTTATTGTATATTTGTTATCTAGTTTGGTTCTGATATTGATGCTGAAAAAATTCAGATGCTCTTTGTTGAAAATTAATAATC
TAAATTCTCTACATGTTTTTGTGATGACATGCTTGTGGATTTTGTGACACAATTGCGTGGACTCCTCTTTTGCCGTTTGTGTGAAAGTTAGATAGAGATT
TAGTCTAGTGTGTCAAGTTTTGAGTTTATAAATACTAATGCAGAAAGAAAACCTTTTTGTTTAACGGTTTCTTGGTTCTCAGCTTGGAGGACAATCTTAA
GTAAAAGTTATTATACGTATAAATATTTTTAGAAGCATCCGAAAAACTTTGTTGACCAATTGAGTAGATTTAAAAAAATAGCAGTAGATGCTGCAACAGG
AGCTTAATATGCAATAGCAATCCAATCCAAAGGCTTCATTGACTTTCTGCTTGCTCTGTGGCTTTTGATTATTTCCAATACCTATAAGAGTACAAACTAG
ATTCATAATTCCAGCAACCCCTTAAATCAGAAAATACAGAAGAGATAATTTTAGAAGAATGGAAAAGGTGAAAAGATGAGAGATGAGAGATGATAGAAGA
AAGATGGTTTCTGTTGAAG