Detailed information on CNT30119340


BLAST search results

BLAST vs Swiss-Prot:
sp|Q655S1|FTSH2_ORYSJ, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694290Citrus clementinaOryza sativa38.9513.7285.59111forward
CNT30674172Citrus clementinaSetaria viridis37.8916.6487.96108forward
CNT30500314Citrus clementinaCoffea canephora37.5424.0487.85107forward
CNT30380808Citrus clementinaManihot esculenta42.1117.9190120forward
CNT30326203Citrus clementinaAsparagus officinalis31.9313.383.5291forward

Expression of CNT30119340

Peptides detected in this lncRNA

>peptide 1 (93 aa)
TCLAKPVICCKSPAAPVVTSGSPKITSSAALPPSPPTILAKSCCFDIKVGSSEGMNQVFSWLSHQETHLHQTSCCYREPLISLFFLECQEHQQ*

>peptide 2 (51 aa)
LFGQTSDLLQITSCSCCHFRLSKNHFLSSSTTESTNNSCKELLLRYQGGVI*

Sequence

>CNT30119340
ACCTGTTTGGCCAAACCAGTGATCTGCTGCAAATCACCAGCTGCTCCTGTTGTCACTTCAGGCTCTCCAAAAATCACTTCCTCAGCAGCTCTACCACCGA
GTCCACCAACAATTCTTGCAAAGAGCTGCTGCTTCGATATCAAGGTGGGGTCATCTGAAGGGATGAACCAGGTGTTCTCATGGCTATCACATCAAGAGAC
ACATCTGCATCAAACTTCTTGTTGCTACCGTGAACCTTTAATATCTCTGTTCTTCCTCGAATGTCAGGAACATCAACAGTAACCT