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Detailed information on CNT30118490


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730480Citrus clementinaCorchorus capsularis20.997.4394.6293reverse complement
CNT30157617Citrus clementinaPistacia vera20.5413.0691.2191forward
CNT30181978Citrus clementinaSecale cereale20.9910.5293.5593reverse complement
CNT30221603Citrus clementinaHordeum vulgare20.997.7293.5593forward
CNT30389404Citrus clementinaTriticum turgidum20.996.4393.5593reverse complement
CNT30592527Citrus clementinaMusa acuminata19.1925.4592.9485forward
CNT30511493Citrus clementinaSolanum lycopersicum20.9910.494.6293reverse complement
CNT30147386Citrus clementinaMedicago truncatula20.996.0394.6293forward
CNT30258698Citrus clementinaAvena sativa20.9911.5193.5593reverse complement
CNT30721163Citrus clementinaTriticum spelta20.999.0293.5593forward
CNT30363124Citrus clementinaSorghum bicolor11.2922.039650forward
CNT30360996Citrus clementinaLactuca sativa20.996.3794.6293forward
CNT30106724Citrus clementinaOryza longistaminata20.9910.4693.5593forward
CNT30550626Citrus clementinaOryza brachyantha15.823.8991.4370reverse complement

Expression of CNT30118490

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MSTCVSFKTKRWAWKQPSFEESLIVHWSSSMAPKMNQGSYI*

Sequence

>CNT30118490
AGAAGTTACGAAAAGACGATGACTTCTACTTGAGTTGCTATTTGGCAGGTTGCCATCCAGCGCTGTGAGCCCTCTTGGAAAGGATTGCATTATTTCATCC
ATGAAAGCAGTGGGAAAACAATGAAGTTCAAGGTGTAGAGGCATTGAGGAAAATTTTGTTGCCAACTAAATACTTGTATTTTTCTCAAATTGAATGTCTA
CTTGTGTGTCTTTCAAAACCAAGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCTTAATAGTTCATTGGTCTAGCTCCATGGCACCGAAAATGAA
TCAGGGCTCCTATATTTGAGATATTATGAATTTATATGTTTCTTTAATACTTGTTTGAATTTGTATTCGATACAATTGTAATAATATATATACTACCAAT
ATTTAAATATGAATTGAAAGATTTTGCAATATGAATCGAGGTG