Detailed information on CNT30118300


BLAST search results

BLAST vs Swiss-Prot:
sp|O50008|METE1_ARATH, E-value = 8e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504596Citrus clementinaNicotiana attenuata44.8519.8486.89122forward
CNT30650401Citrus clementinaRosa chinensis43.0113.2888.89117forward
CNT30717191Citrus clementinaMalus domestica golden36.449.2587.8899forward
CNT30624889Citrus clementinaDaucus carota34.932592.6395forward
CNT3024604Citrus clementinaPopulus trichocarpa60.2916.8982.32164forward

Expression of CNT30118300

Peptides detected in this lncRNA

>peptide 1 (66 aa)
GSVLDATVGDSEGVDCPVQVESMLRFPKRQSFPQGSLINLNNVNACLLKILDFVLDGQSNLAASSI*

Sequence

>CNT30118300
GGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGGAGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGCAATCCTTCCCT
CAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGCCTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGCAGCCTCATCAATTT
GAATAACGTTAATGCCTGCCTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGCAGG