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Detailed information on CNT3011815


BLAST search results

BLAST vs Swiss-Prot:
sp|O80429|FER2_MAIZE, E-value = 4e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695489Zea maysOryza sativa26.2829.8588.18220forward
CNT30675769Zea maysSetaria viridis25.0933.7688.57210forward
CNT30307945Zea maysTriticum aestivum26.0534.3885.78218forward
CNT30398830Zea maysTriticum turgidum26.0530.1985.32218forward
CNT30670012Zea maysTriticum dicoccoides26.0532.1184.86218forward
CNT30683972Zea maysTriticum urartu26.0531.6485.32218forward
CNT30596741Zea maysOryza meridionalis26.2827.387.73220forward
CNT30370929Zea maysOryza glumipatula26.2828.6888.18220forward
CNT30103152Zea maysOryza rufipogon26.2826.3888.18220forward
CNT30584428Zea maysEchinochloa crusgalli26.5221.3391.89222forward
CNT30117400Zea maysOryza nivara26.2825.3788.18220forward

Expression of CNT3011815

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MGAASGLATATLSLSGDEKQGGGARRMLMLRAVAAIGWRWRMDSLDWPAGR*

>peptide 2 (41 aa)
MTTSEVGYAAQVSTQPSATWLSLRKLWSDWSMPSSSAKSRM*

>peptide 3 (32 aa)
MAMEDGLTRLAGRALAAATTHYTTRAATRLAS*

>peptide 4 (39 aa)
MHACIYIYIARIIETTRLISCAGGTACGGTRRRALAVYS*

>peptide 5 (37 aa)
MRLMVGVALNLVIKSCNLEYTQFGTGKSTCMHAYIYI*

Sequence

>CNT3011815
CAGGGCGTCAGTGCCTAGACGGGGATGACACAAAATGGTAGTTGTGATTTTAAGGCCCAAATGTTGGAAACAAAACATGTGTTTAGATCTTAAACAAATT
AAGTGAGTTGCTAAATCAAAATATAGAGCCAATTATGAGACTCATGGTTGGAGTTGCTCTAAACCTTGTGATTAAATCTTGTAATTTAGAATATACTCAG
TTTGGAACAGGGAAAAGTACATGCATGCATGCATATATATATATATAGCTAGAATTATTGAGACGACACGTCTCATCTCCTGCGCGGGCGGTACTGCATG
TGGTGGCACAAGACGACGGGCCCTGGCGGTGTATAGCTAGCTAGAATTATAGGAGGTCATCCTCCTTGTGCGTCTCGATGACGACGTCGGAGGTGGGGTA
CGCAGCGCAGGTGAGCACCCAACCGTCGGCGACCTGGTTGTCGTTGAGGAAGCTCTGGTCGGACTGGTCGATGCCTTCCTCCTCGGCGAAGTCCAGGATG
TAGACGTCGTCGGGCACCTGCAGCTCCACCTCCCCCTCCGGCGTGATCAGCTTCACGTTGTAGGTGGCCTGCGCGCGCAGCAGCTGGCGCCGCATGGGGG
CCGCCAGCGGCTTGGCAACCGCGACCCTGAGCCTGAGTGGGGACGAGAAGCAGGGCGGCGGCGCGCGGAGGATGCTCATGCTCAGGGCGGTGGCGGCCAT
TGGATGGCGATGGAGGATGGACTCACTCGACTGGCCGGCCGGGCGCTAGCTGCTGCGACTACACACTACACGACACGGGCGGCCACACGGCTCGCTAGCT
AGCTGACAAGGGAGAGTTATTGGCGGAGGGAAGGGTG