Detailed information on CNT30118065


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597090Oryza nivaraOryza meridionalis93.7992.5697.64423forward
CNT30551969Oryza nivaraOryza brachyantha40.3520.4793.41182forward

Expression of CNT30118065

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PIMLLLTSEALDVVDPREVVSFLASRFMRL*

Sequence

>CNT30118065
CTCCAATCATGTTGCTTCTCACATCAGAGGCACTTGATGTTGTTGATCCCAGAGAAGTTGTGTCCTTCTTGGCTTCACGCTTCATGAGACTTTGATAGAA
CTCTACAACCTCTGGAGCACGGTGTACCTTGTCACCACCAGCAAGATTCCTAGGTAGGGAACCAGGGGGTGGAGGCGGTGGTGGAGGAGGTGCACCTGGC
GGGCGTGGCGGTGGTGGAGGTAACGCACTTGCAGTGTTGGCAGTGGCTGATGGTGCAGGAGGTGGCCTAGGAACTCTTGGAGCTCTCTTCTCAATATTTG
CAAGTTTCAGTTGTGTCACAACTAGAGGGTTGTTCTGGTTATCACTAGGTTGGTCACTGGATTCAGCATTAGCTGTAGGAGCCTTTTCCTTTATTTGAGC
AAGTTTTGGAGGGAGTGCAGATCTTGGAGATGGCACAATACCTGAACTGTT