Detailed information on CNT30118048


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697920Oryza nivaraOryza sativa37.0568.4391.39778forward
CNT30590960Oryza nivaraMusa acuminata7.8157.7582.32164forward
CNT30578423Oryza nivaraOryza barthii54.05101.0796.831135forward

Expression of CNT30118048

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MASSRPVTDRASVRATIKKSRSPTTSLAAAIFTACSSAGIT*

>peptide 2 (30 aa)
MNLLKIYSLVVKIDRSNLNESLTLKRFSRT*

>peptide 3 (50 aa)
NPNIITHTAIYSYVPCNNNTYLTKFTNNAGELINVIHQISWLPDGQPHFD*

>peptide 4 (47 aa)
MLDRSDLARTCHLIHQRHIYTYKSKVVMGPPYLTVHAWYKMLGPTCH*

>peptide 5 (66 aa)
MIYLSLEKRSGRSAYIYVEIGTPNGIIKTSDRSSVSPGHDKEVPITNDLSRCSYLHSVLLCWYHLI*

Sequence

>CNT30118048
CCAATCCCAACATAATCACTCACACAGCAATATATAGCTACGTACCATGCAATAATAACACATACCTCACAAAATTCACCAATAATGCAGGAGAATTAAT
CAATGTAATCCACCAAATTTCATGGCTCCCTGATGGCCAGCCACATTTCGATTGATAATTTATTCCATTGGTAGCTTGATCTTGATCGATCTTAGTGTAC
CCCATTGGTAGCGCCATTGGTAGCTCCGTTTCCGGCGACGACGGCGGCCGCCTTGGCCTTAGCCTTCTCCATCTCCGTCGTGGTCGTCGTCTCCGGCGCC
GGCAGTGGCTTGGGAACGGAGGAGTTGACGGAGAAGCGGGCCTCGATGTCGAGCCAGGAGTCGAGGCCGACGAGGACGTCGACGAGGGCGCGGGCGGCGG
CGTAGACGGTGGTGAGGGGGGACTTGATGAGGTGGAACCCCATCTCCATGAGCTCCTGCCTCGTGTGCAGCGGCGTCTTCCCGCCCTCCAGCATGTTGCA
CACGCGATAACCCTTGGTCCTCCTGCAGATCTCCATCAGCTCCTCGTCGCTCCGCGGCGCCTCCACGAAGCACGCGTCTGCTCCCGCCTACAATTTTTTT
TACATATATTCATATTAGATATGATATGATGTTGCATAATAACTTAATTATATTTATGGTGATCTCTACTGGTATGAATATATCCTACTAGTAATAAGTA
GGAAAAGAAATTATTCTATTATCCTTAGTTGAGGTAGTAATATAATAGATATGATTTATTTGATTAGAAGAAAATGAACGGTTTATTAGATTGAATTCTA
CAACCGGTAAAGACCAATGTAAAAACACCAATGGGTTAAATTCCATTATAAAGGAGAAAAAAATATACTATACGGATATTGTTTGTGGGCCTAGTAATAG
AAGACAAATAAAGATGCAAACCATTTTCATTTCATTATGTAAAGAAAGTGTTTTCGCCTTACATATATCAGTTTTCAAAATGCAGCTTTGACCAATATCT
AATGAAAAAACTAATTAATTTCAAAACATTGATTCTTGACAGACTTGATGAACTTGCTTAAGATTTATAGTTTGGTGGTTAAGATCGATCGATCAAATTT
AAACGAGAGTTTGACTCTGAAGAGATTCTCTAGAACATGATTTATCTCTCTCTAGAAAAAAGAAGTGGTCGATCAGCTTACATCTATGTAGAGATTGGCA
CGCCTAATGGCATCATCAAGACCAGTGACAGATCGAGCGTCAGTCCGGGCCACGATAAAGAAGTCCCGATCACCAACGACCTCTCTCGCTGCAGCTATCT
TCACAGCGTGCTCCTCTGCTGGTATCACCTAATTTAATTTTAACCAACACAAGGAGAGAGAGAGAGAGATCAAGGTAATTAATGCCGGCCACAATTTTGT
AATCCTTTGATGATGGTGACAAGATGCAGAACATGGTGCACTCGATCTTATTACCACTCTAGCTAAGCTAGAGAGAACATATAATGGCTGTGATAATATC
ATTAATTGATAAAAATGTTGGATCGATCGGATCTAGCTAGAACTTGCCATTTAATACATCAGAGACATATTTATACATACAAAAGCAAAGTTGTAATGGG
TCCTCCATATTTAACAGTGCATGCATGGTATAAAATGTTGGGGCCTACGTGTCACTGAATTAATTCAGCAGAATCTTCATTTCCAATATCAATATGTTTA
GTGAAAGTGAGACCATATATTCAAAGTAGATATAAATATATATCAAATCTCCGCTGTGTGAAATAATAGAGGGTAAATATATATAGCTAGGGCGAATTTT
CTGGTCATTTTGAACCATCCTAGCTAGCTATTTTTGCATTATAACTTGTGATAATTAAGTTGTGATTCATCACATTAGTCCTGTTATTATTTCGATGTCA
GGGAACGACAGGATCGGTTACCAATTTATTTCCTCATTAGATTTTGGCAGGTGTGCATTAAGTGTACGTACTTAAGCTATAAATTGGCATGGATTTGCAA
TGGTGAACAGAGTGCTAAACAGAATTAGTATCACTATACAGTAGTAGTACATGTTTGTCTAGAACATGAAGGGACAAAAACAGTGTCTTGTCAGTATTTA