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Detailed information on CNT30117848


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6I544|GL52_ORYSJ, E-value = 2e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595500Oryza nivaraOryza meridionalis31.0935.42100226forward
CNT30574949Oryza nivaraOryza barthii63.4166.4398.26461forward

Expression of CNT30117848

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MIVLIINKSSSFSPATYYKKLLYYYYILHVALTQISVIKMALYHRQVHIVNPQISPMYTSPYNLISSRSSWGQTWP*

Sequence

>CNT30117848
ATATGGTTCACAGATAGAATCTTCCTCATCTTCCAGCCAAAATGATTGTACTAATCATTAACAAATCATCATCGTTCTCCCCAGCAACTTATTACAAGAA
ACTTCTCTATTACTACTACATTTTGCATGTCGCTCTTACACAAATAAGTGTCATCAAGATGGCATTATATCATCGACAAGTACATATAGTTAATCCTCAA
ATCTCTCCAATGTATACGTCGCCTTATAATCTTATATCGTCTAGGTCTTCTTGGGGGCAAACTTGGCCTTGATCTTGTCCACCTCCTCGTCGTCGATCTG
GAAGGCCTTGGCGAGGACGGCGCCGCGGGGGAAGACGAAGACGTCGCCCTGGGAGATGGTGCGGGAGAGGAGCTTGTTGGCGGTGGTGACGAAGCCGACG
TCGAGCTCGCCGTAGAGGACGAAGACGACCTCGGTGGCGCGCGGGTGGGTGTGCGGCGGGTTGAGGGAGACGCCCAGGGTGTTGAGGCCCGGGACCTTCT
CGACGTTGGCGCCGGTGACCACGGCGCCGGTAGTCCGGGTCGCCGGCGAGCGACGGCGCTGTGGCGACGGCGAGCGCCACCGCCACCGCTGCGAGGAGCA
GAGAGGACCACGACGACCCTGCAGCCCCAGCCATCCTGCTCGCTGATCTCTCTCGCCTGCTAGCTGAGCCTCTGCTCTTCTTCTGCTCGCCGATGGTTAA
TTGATTGATGTGTGTTGACCACTTGTC