Detailed information on CNT30117758


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691471Oryza nivaraOryza sativa95.4571.6597.44273forward
CNT30554298Oryza nivaraOryza glaberrima73.43100.9694.29210forward
CNT30110046Oryza nivaraOryza longistaminata90.9166.8496.54260forward
CNT30100680Oryza nivaraOryza rufipogon99.370.1297.54284forward
CNT30577039Oryza nivaraOryza barthii77.27100.4594.12221forward

Expression of CNT30117758

Peptides detected in this lncRNA

>peptide 1 (31 aa)
CVESVVSEVRGREEKSSEDQSEEARSVVLLS*

Sequence

>CNT30117758
GTGTGTAGAATCTGTCGTTTCGGAAGTCCGCGGTCGCGAGGAAAAGAGTTCGGAAGATCAAAGTGAAGAAGCAAGAAGTGTAGTGCTTCTGAGCTGAAGA
CGGAGTTAGAAGACCAAGGCTCAGACCCCAGTTGAGTTTTGCCTGTGGAGTGGAGCTGAAGCCCCGCTAGAATCGCCTTTTTTCCGCTGCTGCTGCTTTT
GTTTCGGTGTGAGGACTAAGTGCCTCTTCTGTAAGTATTTTACGCTTTATTTACGTTTGGAACTGTTTATTACTTGTCGTTTTGTG