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Detailed information on CNT30117669


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696454Oryza nivaraOryza sativa100.5320.8193.66568forward
CNT30103670Oryza nivaraOryza rufipogon10050.31100565forward
CNT30604657Oryza nivaraOryza punctata37.3534.2591.47211forward

Expression of CNT30117669

Peptides detected in this lncRNA

>peptide 1 (75 aa)
GSSCALGTICCCCLTTGGSTCAFGLFNRPGGSTHNIFGLLNKIGGSAHTLGLFSRVGRFVLSWPPSRGAPVSFPN*

Sequence

>CNT30117669
GGCTCTTCTTGTGCTCTGGGCACAATCTGTTGCTGCTGCTTGACAACAGGTGGTTCCACATGCGCCTTCGGTTTGTTCAATAGGCCAGGTGGCTCGACAC
ACAACATCTTCGGCTTGCTTAACAAGATAGGTGGATCAGCACACACCTTGGGCTTGTTTAGCAGAGTAGGTCGCTTTGTGTTGAGCTGGCCCCCAAGTAG
GGGAGCTCCTGTTTCTTTCCCCAACTGAACTTGAGTACTCTCTCTGTTGAACACTTTCGATCGAGTGATATGGCCAGCTATTTGCATTTTCACAGGTGTA
GCTTCAACCTCTTGCATCACCTTCGTGGACGCGGGATTAGCTCTCTGCATTGACTTCACAGGTGCAACTTCAACTCCTTGCATCACCTTTGTGGGTGCAG
GATTAGCTCTTTGCATCACCACCTTCTCAGAAGGAGGTAGATCAACTCTTTGCATCGCAGCAATCGGTGTTGACTCAGTACTAACTCTCTGCACCATATT
GATTCTTTGCATGGACTTTGCATCATGCTGCTGACTGACTCTTCTTGATTCACCCAGACAATTGC