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Detailed information on CNT30117579


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 7e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30621216Oryza nivaraCajanus cajan50.1642.288.51322forward

Expression of CNT30117579

Peptides detected in this lncRNA

>peptide 1 (39 aa)
HIYTIHSQKWLYFGIEGVFVSDLIEMRNPLIKITPRIST*

Sequence

>CNT30117579
CATATTTACACTATACATAGCCAGAAATGGTTATATTTTGGGATTGAGGGAGTATTTGTTTCCGATCTAATAGAGATGAGAAATCCGCTAATCAAAATAA
CACCACGGATAAGTACCTAGACCATTAGTTGGGAAACGAATAAAATCATTATTGCAAAAACATCATCTTCTTCTTCATCTTCTTAGTGTACACAACACCA
ACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATCCAACCACAATTAACCACTGCTAA
GCTACGGTCCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGATGCTCTG
CGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGCGAGCCCGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCG
TTCCGGGCGAGGAGCTCCGGGAAGACGCAACCGAGCGCGCCCAGCATCGCCCACCGGGAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCG
GGTCGGCGGAGAGCCCCGCGGTGTCCCACCCGTAGTCGCCCG