| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30695846 | Oryza nivara | Oryza sativa | 82.74 | 75.81 | 99.5 | 398 | forward |
| CNT30554851 | Oryza nivara | Oryza glaberrima | 100 | 43.69 | 99.58 | 481 | forward |
| CNT30596860 | Oryza nivara | Oryza meridionalis | 100 | 54.66 | 98.96 | 481 | forward |
| CNT30371067 | Oryza nivara | Oryza glumipatula | 100 | 60.89 | 99.38 | 481 | forward |
| CNT30103490 | Oryza nivara | Oryza rufipogon | 97.51 | 55.11 | 99.57 | 469 | forward |
| CNT30577705 | Oryza nivara | Oryza barthii | 92.52 | 39.49 | 99.55 | 445 | forward |
| CNT30604579 | Oryza nivara | Oryza punctata | 32.22 | 30.27 | 85.81 | 155 | forward |
>CNT30117503
ATAACTTAATAAGCACATTACAGCACACACATGGCCAAGGCAGTTATTTGAATCAGTCTCCAACATACTTCAAATCATAGACCACACCATACAGCAAACA
TAGTATAAACATTGTCATAGAGAGTACAGCTGATAGCAGCTTGTAATATTCTAGCATTACTTTGGTAGCATCCCTCTACAAAACATAGCAGACATCACCA
GCTCTTCATCTTGGCCATACACATTCAACCTGACAAGAAAACCATATCCCATTTTACAACATATGTAATCTGTACATGAAAATGTATCTACAAGAAATCA
AAATAGTAGGTAGTGTGGAGTGCCTTACATGGTTTGCTAGTGACAGACCACACTGACCAGAACATTTCGTCTCCTCAGTAGCATCATTTTGCAGAAGGTT
GTCCATTGATTCATCTGAGCTGCTCTCAACATAAGGTAATGGCAAATACTTCATCTCGGGATCGACGGCGGGCATGTTTTG