« Back to Oryza nivara search


Detailed information on CNT30117285


BLAST search results

BLAST vs Swiss-Prot:
sp|Q56YA5|SGAT_ARATH, E-value = 7e-74

BLAST vs NONCODE: nothing found

Expression of CNT30117285

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSGVEFDRYAAAAATPEPSFTGWPILNTLPATLLRPRPRRLCLLMTFSRPSSKMRSRAVRRP*

>peptide 2 (51 aa)
MPRPVGSESAFCEPVSATSTPHSSMRKSNAHIDDTPSTSSSAGCLGCRWWS*

Sequence

>CNT30117285
AGTCGATCGATCTATATATAATTAAAATTAAGAGGCATTAGGGAATGATGATTAATTTAACTGTTCACTGTTGTATACATCGAGGTTCAAGATTAATTAA
GTAAAAGCTGCAGTACCTTCACAAAATTATACTCCTTACTCCTTAGCATAGAGCTGATCGATGGAGCGTATAAAAATTTAACTTTACATACAGAGACCAA
ATTATATGCAATAGGATTAATTTGCCGCTGTTCCGTTCTGCCAAACTGCAGGCAGAACCATCGCTGCTGAGAATTGCTTTCCTTCCTTCGTTCGTTGTGC
TTCAGATCCTGGACGGGATGAGCGGCGTCGAATTCGACAGGTACGCCGCCGCGGCCGCCACGCCGGAGCCGAGCTTCACCGGGTGGCCGATCCTGAACAC
CTTGCCGGCGACCTTGTTGAGGCCGAGGCCGAGGCGGTTGTGCCTCTTGATGACGTTCTCGAGGCCTTCCTCGAAGATGAGGTCGAGGGCGGTGCGGAGG
CCGTAGAGGAGCTGGATGGATGGGGTGTAGGGCCAGTAGGTGCCCATCTTGTAGAACTTGAGGTAGTCCTTCCAGTCGAAGAAGACCCGCACCGACTTGG
CCGTCTTGCTCGCCTCCAGCGCCTTGGGGCTCGCGCACACGATGCCCAGACCCGTCGGCAGCGAGAGCGCCTTCTGCGAACCCGTCAGCGCCACGTCCAC
TCCCCACTCATCCATGCGGAAGTCCAACGCGCATATCGACGACACCCCGTCCACCAGTAGTAGCGCCGGGTGCCTGGGGTGCCGGTGGTGGTCTTGAAGA
TCTGCTTGACGTCCTCGAGGAGGGTCTTGGTGAGGGCGGGCACCGCCGGCGAGCGGTAGTCCTCGTTCTGACGGCTCATGGCGCGGATCACCTGGTCCGG
GATGTTCACCGGCCCAGGCACGAACAGGTGGTTCCGCCCCGGCCCATACACGTAGTCCGCCATCTCCCTGCCCACACACACACACACACAAAGGCCCATC
AGGCCCAAACAAAAAATAATTATTCGTCCCACAGCAATAAAAACTCCTGCCTAATATAACCTTCTGAAAGTGTTCTTTGAAAAATGACTAGTGATAATCT
CATCTTACTATCTTAGTTGTACTATATACGGTTTGTTAATTGTTTTGCTCTAATTATCCGACTATATAACATAGCAAACATATAATTAATACATGGCTTT
AGTTAGACATAACACTACACTACGAAAAACAAAGGCAGGAGTACTTGCTAGTACTAGTTGTCACTAATAACGCAGAAGACGTTATCAATTTGGACAGTTT
CACTTATCCAAGGAAACCATTAGTCCTTTCTTCCTTTTTTTTAATTAAAGAAACGACTATTAGTGCGTGCTCTGATCCTACTTGGCAGATTAACTCGTGC
TTATCCAGAAGAAATCAATTCATGCGGCTACTGGCTCTCTGTTTTGAAAATTCAAGTTGCTAGCTCTAGACAATAACAAAGCAAAATTTCTCTGAACTTA
GTCTAAGTTTCAATTTCTTCTTGCACATACAAAATCCAACCATATGGCTAAACTGAATTTACTCATACACCTACGATCATTGAAGATCTAATAGAAGACG
CTAATGGAGATGGATGTGTGTACCTTGTTCAGATAAAGCCTCCTCGATCTTGTGCTGATGATTTTTTTTTTCGCACGTAA