CANTATAdb - search

Detailed information on CNT30117229

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6Z4N4|40G3_ORYSJ, E-value = 2e-41

BLAST vs NONCODE:
NONZMAT000139, E-value = 9e-61

Expression of CNT30117229

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLFTMRMHLNPIFQRWLSPLHHSQSTTVVPSWTPPWSLSPWKASKLR*

>peptide 2 (30 aa)
MLLTMRMQRKPWPTSLLSVHSTDSSWYSGLY

>peptide 3 (39 aa)
MEGVKVEVDVVDHADAAEAMADVLALGPQHRLVLVLWVVR

Sequence

>CNT30117229
TGTATGTGTCGCCCAGCGAGAGGAGCTCTTATTGCCAGGTAATTAATTAACTTGTACAAGATACAAGCACACCACACGATAATCATACGGTACGGACGAG
CATAAGTTACTCTTAGCTACGTATATAGGTGGGTAGCTAGCAGAGAATAATTATTCTGCACCAGATTCGTTGATATCAACTTGAGCCTTGATAGAGAGCT
GGATCGATGTATCGATCAGCTCAGTAGTAGGGCTGGATCTTCCAGCGCTGGTTGTCGCCCTCGCACCACTTCCAGAGCACGATGTCGGTGCCGTCGCGGA
CGCCGCCGTGGTACTTGTCGCCGTGGAAGGCGTCGAAGTTGAGGTAGATGTTGTTCACCATGCGGATGCACCTGAACCCGATCTTCCAGCGCTGGTTGTC
GCCCTTACACCACTCCCAGAGCACGACGGTGGTGCCGTCGTGGACGCCGCCGTGGTCCTTGTCGCCATGGAAGGCGTCAAAGTTGAGGTAGATGTTGTTG
ACCATGCGGATGCAGCGGAAGCCATGGCCGACGTCCTTGCTCTCGGTCCACAGCACCGACTCGTCCTGGTACTCTGGGTTGTACGG