Detailed information on CNT30117174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595655Oryza nivaraOryza meridionalis84.1930.9587.77229forward
CNT30101102Oryza nivaraOryza rufipogon7535.2994.61204forward
CNT30574788Oryza nivaraOryza barthii93.3833.6489.37254forward

Expression of CNT30117174

Peptides detected in this lncRNA

>peptide 1 (48 aa)
QPVVFRGLDNQVAYLGFICVGARVKLKFLPKPGVQSYKLVLFQPSSQI*

Sequence

>CNT30117174
GGCAACCTGTGGTATTTCGAGGATTGGATAATCAGGTTGCCTATCTCGGATTTATTTGCGTTGGAGCAAGAGTTAAATTGAAGTTCTTGCCGAAGCCAGG
AGTTCAATCATATAAGTTAGTCTTATTTCAACCTAGTTCTCAAATCTAGATTAGTTAGATGGTTTAAGTCTATAGCAAAACATTAGAGTTGAGTCATTCT
ATAGCTTCTGCTGTAATAGTTAGCCACAAACTTGCAAATTCCCATATTATTTTATGCAATAACATCTCCTTT