Detailed information on CNT30117142


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099852Oryza nivaraOryza rufipogon20.589.2190.5985forward

Expression of CNT30117142

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MSPTCQLATSSLSPLLSLSPLSLFSCLGR

Sequence

>CNT30117142
TTTTTTTATTAATCTATGTTTAATACTCCAAATTAACGTCCAAACATTTGATGTGACATGAACTAAAAAGTATTTTTTAGTCCCATCTAAACACCCACTA
AGCCACCTCTTGTCATGCTTTCTCCTTCTTGGAAGCATAACACAGGTACTTGGGGTAAGGCTGGATCTCTGCTCGTGGACCTGTGGTAACAATTTTATTG
GAAAAAGTATATCGAAGGTCCCTCAACTTGTCATTGGTTTATCGTATACGAGGTCATCCGAGGTCTCATAGTAGTTTTGACCCCGGTTTTGGTCTACGTG
GTGGCTGAGTCAGCGTGGGACCCACATGAGCCCCACATGTCAGCTGGCCACGTCATCACTCTCTCCCCTCCTCTCCCTTTCTCCTCTCTCACTCTTCTCC
TGTTTGGGTAGGC