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Detailed information on CNT30116966


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENG7|ATPB_ORYNI, E-value = 2e-116

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674625Oryza nivaraSetaria viridis2.7134.1596.9197reverse complement
CNT30197557Oryza nivaraPisum sativum25.6659.2984.55919forward
CNT30184954Oryza nivaraSecale cereale8.5255.2590.82305forward
CNT30300733Oryza nivaraTriticum aestivum2.8849.2895.15103reverse complement
CNT30220567Oryza nivaraHordeum vulgare2.8844.9895.15103reverse complement
CNT3088631Oryza nivaraVigna radiata5.9530.9182.63213reverse complement
CNT30556053Oryza nivaraOryza glaberrima5.9540.6599.53213reverse complement
CNT3082983Oryza nivaraBrassica juncea22.4533.4984.2804forward
CNT3017912Oryza nivaraZea mays19.9910096.37716forward
CNT3067537Oryza nivaraLeersia perrieri2.7933.993100reverse complement
CNT30682870Oryza nivaraTriticum urartu1.5622.8694.6456forward
CNT30371178Oryza nivaraOryza glumipatula9.1625.198.78328forward
CNT30154378Oryza nivaraPrunus persica11.7692.5385.99421forward
CNT30416813Oryza nivaraPapaver somniferum27.8144.6284.84996forward
CNT30645933Oryza nivaraCannabis sativa25.3696.1981.5908forward
CNT3058692Oryza nivaraAmborella trichopoda5.6752.5991.63203forward
CNT30150432Oryza nivaraBrachypodium distachyon4.0525.1793.1145forward
CNT30102868Oryza nivaraOryza rufipogon1.4222.7710051reverse complement
CNT30577541Oryza nivaraOryza barthii18.8582.8295.11675forward
CNT3039583Oryza nivaraMarchantia polymorpha2.6223.2192.5594reverse complement

Expression of CNT30116966

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGAWFGNTPIWPLLVDKIISFTSQSQIIRLGVST*

>peptide 2 (38 aa)
MKDFPIFLDFLKIFLNLTMNRLIYLDIYRYNVHYGVDL*

>peptide 3 (56 aa)
MSLLSRFSPFNFFFSSFPLNSSLLDSCLKESKKMNRTKNTQKRAYRPETITKSSSQ*

>peptide 4 (45 aa)
MPVKNCFNLSPKQTRSISLKINTQPYGYMKGANSFIPHPIRGNKT*

>peptide 5 (31 aa)
MSLPSSASFPKMMISLLTILAKPLHRTAVNH*

>peptide 6 (46 aa)
MLRDSVLIIQILFVFWMQFQLVFGYKSRKCIFFLNMLLREKGVNPF*

>peptide 7 (42 aa)
MKQRRFLTVSGWYFDRGPFLYFLFCSELNKEFGEENIFPHLS*

>peptide 8 (83 aa)
MCKCCSRSRVGQIVRRYINRLDRSYRSLFSRSNSFLQRTHFCTKSRLITHKRKGLRWIPRYPETRKGVASDEMLQGIENKHRFG

>peptide 9 (73 aa)
MGHVGFSISIYHRTLRVPEPSFFASFRKRKTLNQEQYKFYCPPFTRKLVIKLHYSLFKMHQSESLENIQVPYF*

>peptide 10 (58 aa)
MQNYASRLCTHNPNSICFLDAISISLWVQIAKMHILPQYAIERKRSKSFLRTKVFIGI*

Sequence

>CNT30116966
GGTCAAAATGGGTAGAATCCATATCAGTCCATAGACTTCTTTTAATAATTCCAAGTTCGAAAAAGAATTGATAGCTTCTACCTGTACCCTGTCTATTATC
ATTTCAACGATCAACTTCTCCCATAATGATATCTATACTACCTAATATCGTCATGATATCAGCCAATTTCATTTTTTTGACTAGCTGAGGAAGAATTTGA
CATAGATCCGTTACTCATATTTTAAAAATTGGAATCCTTAATCCAATGCAAAATTATGCTTCGCGACTCTGTACTCATAATCCAAATTCTATTTGTTTTT
TGGATGCAATTTCAATTAGTCTTTGGGTACAAATCGCGAAAATGCATATTCTTCCTCAATATGCTATTGAGAGAAAAAGGAGTAAATCCTTTCTAAGAAC
TAAAGTTTTCATCGGAATATAAAAAACCTTAAGGACGCCTTAAGTATATCATTTCAAATTCAGTTATTAATAGAACGAATCACACTTTTACCACTAAACT
ATACCCGCTACATGTAAATTCTGATACCAACGCTACCCTTTGTCAAGGGTAGCCATTCGAGAAAGATGCTAATTCCCTCTTAGTTAATGAAACAGAGAAG
GTTCCTCACAGTTAGCGGTTGGTACTTCGATCGCGGGCCTTTCCTTTACTTTCTTTTTTGTTCAGAATTGAACAAAGAATTTGGGGAAGAAAACATCTTC
CCCCACTTATCATGAAATCTGGGCCATAGAGAAAGAGTGAGATGTTTTTTTTTATTTATCATAGACTTTCCCTATGGCTTGAGAGAAACAATAAATAACT
TAAAGAAAAAGGCACATAGGAGCCGAAGGATTTACTTGATGTAAAGAAGATTCTGAATGTCTCTGCTTAGTCGATTCTCTCCGTTTAACTTTTTCTTCTC
TTCTTTTCCACTCAATTCTAGTTTATTAGATTCTTGTTTAAAAGAATCAAAGAAGATGAATAGAACTAAGAACACACAAAAAAGAGCATATAGGCCCGAG
ACCATTACCAAAAGTTCTTCCCAATAATCATATTGGGTATCTGTTCCCTTCCTTTTCCTATTAGGATGGGGCATGTTGGATTTTCCATATCCATATACCA
TCGAACCTTAAGGGTTCCAGAACCCTCCTTTTTTGCTAGTTTTCGGAAACGGAAAACCCTGAACCAGGAGCAGTATAAATTCTACTGCCCGCCTTTTACA
AGAAAATTGGTGATAAAACTCCACTACAGTTTGTTCAAAATGCACCAATCAGAATCCCTTGAGAATATTCAAGTACCCTATTTCTAAGATATTTCTAAGA
GAAGAGGTACCTGCTGAAAATCGCTTCAACAAATCCGCTTAAGAAAAATTGCAAAGTTTTGAACTCGAAGGTTTTTCCAAGGGATGCCTGTTAAAAATTG
TTTCAACCTCTCACCAAAACAGACAAGAAGTATATCACTGAAAATTAATACCCAGCCATATGGGTATATGAAGGGCGCGAATTCGTTTATACCCCACCCA
ATTAGAGGAAATAAAACATAAATGGAGAAAGTTTTCATGATAAGATCAGCCAATAGAAGAAAAAAGTCCCTAATTTTTCAGACCGTTCTGAGCATGTGAA
AAGTCAATAGCCTAAAGATAAAAAACCCTATACTTTGTGCAAGTGATAAGAGAGAATATGAAAGATTTTCCTATTTTTCTTGATTTTCTTAAGATTTTTT
TGAACCTGACCATGAATAGACTTATATATCTCGATATATACAGATATAATGTACATTATGGAGTAGACCTATAATGGGAAATGAAAGTGGCTAATTTTGG
AATTGAATAAGAAGCCCTTTTAACTCAGTGGTAGAGTAATGCCATGGTAAGGCATAAGTCATCGGTTCAAATCCGATAAAGGGCTTTTTTTACTTAGTGG
TAGAGTAATGCCGCGGTAAGACGTGAGTCAGTGGTTCAAATCCGATACAGTACTTTTCTACTAAATTCATTCACTTTCTTTCTTTTTGAAAATTTCTCTT
TTTTTATTGAATTTGATAACTTAGTGCGAGATGCATGCATTTTTAGTTTAAACACTAAGCGAAGCAGGGGGGTGTAAATTCCAAAAAAGAAATTGTACTC
TTTTTCCTATTAGATCAATCAAATCACTACCCGTACTGAACTAATATAGAATCCCTTTTATTAATCTATTCTTATTCCATATCCTTTATAAACGAATTTC
CCTAAAAAGTAGGGGATGATCCGTGAANATAATCGATCGAAGTAAAGGGTCTTCCTTTGTGGTGATAAATTGCCTACTTAACTCAGTGGTTAGAGTATTG
CTTTCATACGGCGGGAGTCATTGGTTCAAATCCAATAGTAGGTAGGTAGGTAGAAAAATTACTAGATAGCATTGGCCCTACTTCGCTTCGCTATCTAATA
ATTTTTTCTACCCCTCTTCCCTTTTTCTTTGTATCAACTAAACCGTTGGGTTGTCTTCAATTAGATGGGGGAATCCAATTAACAGCCTCGACTCGTATCC
TAGCTCGTCTGAGAGCTACCTTCGCTTCAACCAATTCTTTCGTACCCTCAGCTCTACTCACGTTAGCTTCGGCTATTTCAAGTGCTTGTTGAGCTTCTTC
CGGATCAATGTCACTACCCAGTTCTGCATCATTTCCTAAAATGATGATCTCATTATTAACTATTCTGGCAAAACCGCTCCACAGAACCGCCGTTAACCAT
TGATCGTTGAGGAGGCGTATTCTCAAGGGACCCATATCTACAGCTGTGTTAATGGGGGCGTGGTTTGGTAATACGCCAATTTGGCCACTATTAGTAGATA
AAATAATTTCTTTCACTTCACAATCCCAAATAATTCGCTTAGGAGTCAGTACATAAAGATTTAATTTCATTTCTTCAATTTGTTCTCCTCTTCTAAGTTT
ATAGCTTTCGTGCTAGCTTCATCGATGTTACCCACCAAATAAAAAGCCTGTTCGGGTAGGCCGTCTAATTCTCCGGAAAGGATTAGTTGAAATCCCCTAA
TAGTTTCTGCAAGACCAACATACTTTCCCGGAGAACCGGTAAAAACTTCTGCCACAAAAAACGGTTGTGATAAGAAGCGCTCAATTTTTCGTGCTCTTGC
TACAGTTAAACGATCCTCCTCCGATAATTCATCCAACCCAAGAATTGCGATAGTGTCCTGAAGTTCTTTGTAACGTTGTAAAGTTTGCTTAACTCTTTGC
GCAGTTTCATAATGTTCGTTGCCAACGATCCGAGGTTGTAACATAGTTGAGGTTGAATCTAAAGGATCTACTGCAGGATAAATCCCTTTGGAAGCTAATC
CTCTGGAAAGTACGGTAGTAGCATCCAAATGTGCAAATGTTGTAGCAGGAGCAGGGTCGGTCAAATCGTCCGCAGGTACATAAACCGCTTGGATCGAAGT
TATAGATCCCTTTTTAGTAGAAGTAATTCTTTCTTGCAAAGAACCCATTTTTGTACTAAGAGTAGGTTGATAACCCACAAGAGGAAAGGCTTGCGGTGGA
TACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCAGGGAATTGAAAATAAGCATAGATTCGGAG