Detailed information on CNT30116854


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DKY4|METK1_ORYSJ, E-value = 5e-73

BLAST vs NONCODE:
NONORUT006297, E-value = 1e-35

Expression of CNT30116854

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MTMFVLVQVSQATLLSGSSARQASSTASETWSQSLSGWPSFTDSEVKRKVSSAAIFSYLHKMVFHIL*

>peptide 2 (64 aa)
MMIMPVPYVSTNTDSGSGTPMAYDTWTMQRRARPLATMLLAACLATYAPLRSTLVGSLPEKGAW*

>peptide 3 (92 aa)
MIRPQDNQPRAQIQPESLILPRTLKPSSPFSSRKNEGRSRTAATHTQQRYQQRGQGNRRLTCGGGGGGGGGGAGPIRSGGGGGGGGKLIRSDR

>peptide 4 (49 aa)
MLHCGQPWLGPCQRRALGEVAVHTLCNVRGLLLDVHKHLTVVSIETDIS*

>peptide 5 (53 aa)
MKGEAGQQQHTRNNATSNEDRGIGGSPAAAVAAAEEEEPGRSDRGEEEVEEVN*

>peptide 6 (48 aa)
MYYNYHINIPLLGVNISWRPGKKERNRWLAFRGSTILFTCNLSTRQTS*

>peptide 7 (48 aa)
MVYATKFVLSKQVKKTVARNKTFLLILYIAYVRQDAVLLAPDKTTILG*

>peptide 8 (36 aa)
MLFISKPFDKHQGIKHLKGSHPTASLSISIHNNKQA*

>peptide 9 (38 aa)
MSGDCCSMFTSTLQWSASRPTSADTKPMLRHVSLTIFS*

>peptide 10 (30 aa)
NFKRHKGHFQLQQTHELSTHRSPGNHIGIE*

>peptide 11 (32 aa)
MAAGGRLRITMLSSEETKHHNGTEQKLPKGSF*

Sequence

>CNT30116854
TCAACTTCAAAAGGCACAAAGGTCACTTCCAGCTTCAGCAAACACATGAACTGAGCACTCACAGATCACCAGGGAACCATATAGGGATAGAATAACCAAA
ACATAGGAGGTTTCATTTCTTCTTCTCAAAGTAGTGTAGCATCTTTCCTTCTTTCACCATTACATAAGCTTAAGCAATAACAGATAACAAATCCTCCTCC
TCCTCCTCTAGGTAAAATATTCAAACACAATACCCTTATAAGTACTTATTATTAGGAAAGTAGCGTGCATGGGCATAAATGGCAGCGGGGGGCAGGTTAA
GAATCACAATGCTGAGCAGCGAGGAAACAAAACACCATAATGGGACAGAGCAAAAGCTTCCGAAAGGGAGCTTTTAGGCAGAAGGCTTCTCCCACTTGAG
GGGCTTCACCACCTCCCAGGTGAAGTCTGGGTCGTCCCTTCCGAAGTGACCGTAAGCCGCCGTCTTGAGGTAGCGTCCGTTGCCGCCTTTCTTGAGGTCA
AGGTTGATGATGATCATGCCAGTGCCGTATGTGTCGACGAATACGGACAGTGGCTCTGGGACACCGATGGCGTATGATACTTGGACAATGCAGCGGCGAG
CAAGGCCACTAGCAACAATGCTCTTGGCAGCTTGCCTTGCGACGTATGCTCCACTGCGGTCAACCTTGGTTGGGTCCTTGCCAGAGAAGGGCGCTTGGTG
AAGTGGCCGTGCACACCCTGTGCAATGTCAGGGGACTGCTGCTCGATGTTCACAAGCACCTTACAGTGGTCAGCATCGAGACCGACATCAGCTGACACAA
AACCGATGTTACGGCATGTCTCCCTGACAATCTTCTCATAGTCAACGTTAGCCTTGGTGGTGATCTCACCAAAGACCATGACCATGTTTGTCTTGGTGCA
GGTCTCACAAGCGACCTTGCTGTCAGGGTCCTCGGCGAGGCAGGCATCAAGCACAGCATCTGAGACTTGGTCGCAGAGCTTGTCAGGGTGGCCCTCGTTC
ACAGACTCCGAGGTAAAGAGGAAGGTATCAAGTGCGGCCATCTTCTCCTATCTGCATAAAATGGTATTTCACATACTTTAGACAAAGAAATATCATGAAT
AAAATGGACATGGTGAGCCTATGAGAAAAAAAGGGGTATAAGTGATAGCTAATGTGAAGGGAAGCTGATAGCGACAATTGATTTCTGGAAATGCTTACAT
AACACACTGAGAGGACAATACTGATCCCTAGAACAAATGGTTTATGCAACAAAATTTGTCCTGAGTAAACAGGTTAAAAAAACAGTAGCAAGGAACAAAA
CATTCCTTTTAATCCTCTATATAGCTTATGTACGCCAAGATGCTGTTTTGTTGGCACCTGACAAGACCACAATTTTGGGCTAAAATAGTTGTCCCTACAA
AGAGTTGACTAAGTTCCTAAGTTCCTTGGGCAAGTGTTAGGTATTTGTAATATTCTCTACAAGCGCAACAAGCAGGTATAGAGCACAAGGAATCTAACAT
TTTTCTGCCGGAATCAGCATAAACGCATAATCAATCGTGGTGCCACTATGTATTATAACTATCACATAAATATACCACTTTTAGGGGTAAACATATCCTG
GAGACCTGGAAAAAAAGAGCGAAATCGCTGGCTAGCTTTTAGGGGTTCTACTATACTCTTTACATGTAATCTTTCCACAAGACAAACATCATAAATCATT
GAACATGCGCATCAACTAATCAAGCGCATAAAACAACAGCAGAAACATATCAATTCGTCTTGGCATATTTAACTTTGAAGTGGCACCAATCAATTTTTTT
TCCATTTTCCGTTCATTTATAAGAATTCCAACTCCCAAGACCAAGGGGATGACTCGAATCTACCGCAGAACAGTCAAATGAGCTGACAGCCAAAGACATA
ATACTAGCACTAAAACCACTGCTCTAGCATGTTGTTTATCAGCAAGCCGTTTGATAAGCATCAAGGTATTAAACATCTAAAAGGAAGTCATCCTACTGCT
TCTCTCTCCATCTCCATCCATAATAATAAGCAAGCATGACAAAAATAAAACTTACAACACCTAAATCCAACCAAAGAAACCCCATCTAAATCTACCATAC
CACAAGATCGAAAGAAAAGCAATAAACCCTCCTTATAACCCTCCCAAGCCAGCACAAACAAATCAATATCTAGGCACGATGATACGTCCGCAAGACAACC
AACCACGAGCTCAGATCCAACCTGAGAGCTTGATCCTACCAAGAACGCTAAAACCCTCCTCTCCCTTTTCAAGCCGCAAGAATGAAGGGAGAAGCCGGAC
AGCAGCAACACACACGCAACAACGCTACCAGCAACGAGGACAGGGGAATCGGCGGCTCACCTGCGGCGGCGGTGGCGGCGGCGGAGGAGGAGGAGCCGGG
CCGATCCGATCGGGGGGAGGAGGAGGTGGAGGAGGTAAATTAATTAGATCCGACCGGGC