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Detailed information on CNT30116851


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 3e-128

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522251Oryza nivaraSetaria italica68.5780.6590.17600forward
CNT30589923Oryza nivaraMusa acuminata54.4104.8587.39476forward
CNT30685843Oryza nivaraTriticum urartu58.5167.3788.67512forward
CNT30579007Oryza nivaraEchinochloa crusgalli66.8669.5691.97585forward

Expression of CNT30116851

Peptides detected in this lncRNA

>peptide 1 (49 aa)
RTDLLGRRTNWHRFSWLRCRSYNNDTSLIRSSLGCGLRLTLNLDPKKQR*

>peptide 2 (80 aa)
MHCCNCNCRLVAYAQALLATGSATWSKRFSMGPLPVTMAWTKKPNMENMARRPFLSSFTLSSAKVSGSSARPSGGPPPTR*

Sequence

>CNT30116851
CCCGCACCGATTTATTGGGTCGACGCACAAATTGGCATCGTTTTAGCTGGCTTCGTTGTAGATCCTATAATAACGATACATCATTAATTCGATCATCCCT
TGGATGCGGCCTGCGGCTTACATTAAATCTCGATCCAAAGAAGCAAAGATGATGACAGACAGAAATTAATTAAGCTAGAAATCTCCTCGATCGATCACAC
ACACACACACACAATTAAGGTACATACATACATGCACTGCTGCAACTGCAACTGCAGGTTGGTGGCGTATGCCCAGGCGTTGTTGGCGACGGGGTCGGCG
ACGTGGTCGAAGAGGTTCTCGATGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCT
CCTTCACCTTGAGCTCGGCGAAGGTGTCAGGGTCGTCGGCGAGGCCGAGCGGCGGGCCGCCGCCGACGCGGTAGCCCTCGACGAATCCCATGAGCACCAC
CTGGACCGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTCCCCAGGTAGTCGAGCCCCCCCTCGGAGAAGATCTGCGCGCCGGCCTTG
AACCACACCGCCTCCCCGAACTTCACCCCGTTCTTGGACAGGATCTCCGGGAAGACGCAGCCCAGCGCCCCCAGCATTGCCCACCGCGAGTGGATCACCT
CCAGCTCCCTGTTCCTCGCGAACGTCTCCGGGTCGGCCGATAGCCCCGCCGTGTCCCACCCGTAGTCTCCCGGGAACTCTCCGGTCAGGTACGATGGCGT
CTGCTCCGAGAACGGGCCCAGGTACTTGGGACGGTCAGGTCCATACCTGCACATATATATACTTGTATGTTAGCA