Detailed information on CNT30116818


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694818Oryza nivaraOryza sativa20.542.8710053forward
CNT30101667Oryza nivaraOryza rufipogon86.8211.0596.88224reverse complement

Expression of CNT30116818

Peptides detected in this lncRNA

>peptide 1 (43 aa)
RESLRFHPKPPAEPAKGGLRGLPVRSHELRHLARQVGGSACVF*

Sequence

>CNT30116818
AGAGAGAGAGCTTGAGATTTCACCCTAAGCCCCCGGCCGAACCGGCAAAGGGGGGCCTGCGCGGTCTCCCGGTGAGGAGCCACGAGCTCCGTCATCTGGC
GCGCCAGGTAGGGGGCTCAGCGTGTGTTTTCTGAGCTCTCATACTCTTCCGTGTGCGCCAAGTTTCCCTTGTTCAGCCTAATGGCCGAGTTAGCGAAGGC
GCACGACCTCTCTCCGAGTGTGAGCGGCGACGACGGAGAGCCAAACCCACGCCGTCGA