Detailed information on CNT30116652


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289785Oryza nivaraTriticum aestivum41.6940.3397.97148forward
CNT30436129Oryza nivaraAegilops tauschii30.4234.1899.07108forward
CNT30366141Oryza nivaraSorghum bicolor28.4514.5794.06101forward
CNT30101296Oryza nivaraOryza rufipogon69.8643.1399.6248forward
CNT30576176Oryza nivaraOryza barthii94.0810099.7334forward

Expression of CNT30116652

Peptides detected in this lncRNA

>peptide 1 (48 aa)
RFNLNTLLFTHAPIRTLIRGRQWLAGELANATPRYCDRVRRRLTARTL*

Sequence

>CNT30116652
ACGGTTTAACCTGAACACTTTATTATTCACTCATGCACCGATACGTACACTAATTCGTGGGAGACAGTGGCTAGCCGGAGAGCTAGCAAATGCAACACCC
CGATACTGCGACCGTGTGCGACGACGACTGACGGCGAGGACGCTATAGTGGACTCTAACACATAAGCCACGCACCCGCACGGCGGCGCTCGATCTGGCTG
TCTGGCTAGTTCTTGAGGAGGTAGTCGTCGAGGTCGTGGAAGTTCTTGTAGAAGCTGACCAGCTCGCCGTCCACCACGCTGTACGACACCACCTTCTTCT
CGTCGTCCGCCACCTCCACCTTCTCCTTCGCGAACGTCACCATCGGCACCCCTTC