Detailed information on CNT30116611


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XLR1|PIP26_ORYSJ, E-value = 6e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531266Oryza nivaraEucalyptus grandis27.7213.2489.2956forward
CNT30730253Oryza nivaraCorchorus capsularis22.289.8991.1145forward
CNT3070602Oryza nivaraQuercus suber22.2814.2991.1145forward
CNT30632234Oryza nivaraVigna unguiculata20.311.9992.6841forward
CNT30159576Oryza nivaraPistacia vera37.139.478875forward
CNT30569510Oryza nivaraActinidia chinensis37.1336.0693.3375forward
CNT3079298Oryza nivaraBrassica juncea24.2611.5389.849forward
CNT30450547Oryza nivaraSaccharum spontaneum31.6820.5887.564forward
CNT30213185Oryza nivaraHelianthus annuus28.2210.3191.2357forward
CNT30129030Oryza nivaraCorymbia citriodora37.1312.7189.3375forward
CNT30355349Oryza nivaraLactuca sativa38.611391.0378forward
CNT30704435Oryza nivaraPrunus avium29.218.9391.5359forward
CNT30113851Oryza nivaraFicus carica36.6326.7193.2474forward

Expression of CNT30116611

Peptides detected in this lncRNA

>peptide 1 (65 aa)
GIALWVGGGEDGVDEDEGADDFGAEGGAVDEDEDHATEGPGDAEGADAAALVGGRLHLVPNDGGDG

>peptide 2 (34 aa)
MKIMPPKAQAMPRVPTPPHWSADDCTLYPMTVATV

Sequence

>CNT30116611
CGGGCATTGCGCTTTGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGGACGAAGGTGCCGATGATTTCGGCGCCGAGGGCGGTGCCGTAGACGAGGATGA
AGATCATGCCACCGAAGGCCCAGGCGATGCCGAGGGTGCCGACGCCGCCGCACTGGTCGGCGGACGACTGCACCTTGTACCCAATGACGGTGGCGACGGT
GA