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Detailed information on CNT30116492


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604840Oryza nivaraOryza punctata32.7643.5595.39152forward

Expression of CNT30116492

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PIMLLLTSKTLDVVDPREVVSFLASRFMRL*

Sequence

>CNT30116492
CTCCAATCATGTTGCTTCTCACATCAAAGACACTTGATGTTGTTGATCCCAGAGAAGTTGTGTCCTTCTTGGCTTCACGCTTCATGAGACTTTGATAAAA
CTCTACAACCTCTGGAGCACGGTGTACCTTGTCACCACCAGCAAGATTCCTAGGTAGGGAACCAGGGGGTGGTGGCGGTAACGCACTTGCAGTGTTGGCA
GTGGCTGATGGTGCAGGAGGTGGCCTAGGAACTCTTGGAGCTCTCTTCTCAATATTTGCAAGTTTCAGTTGTGTCACAACTAGAGGGTTGTTCTGGTTAT
CACTAGGTTGGTCACGAGCAGAAATTTTCTCAGACGGTGCCTGGTAGTTGCGGAGCTCATATCTCAGACAAGCATTAACCCAACGCAGGTAAACCAACTC
TTCTACTTCACTGAATCTGGTCATTTGTAGGCCTTCTACTTGCTTGGTAAGGTCTTCATTTACA