Detailed information on CNT30116375


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT001333, E-value = 8e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30529029Oryza nivaraEucalyptus grandis24.314.386.3688reverse complement
CNT3020650Oryza nivaraCitrullus lanatus55.5211.5581.09201reverse complement
CNT30201723Oryza nivaraPisum sativum23.483.0885.8885reverse complement
CNT3047566Oryza nivaraPrunus dulcis24.864.6787.7890reverse complement
CNT30170457Oryza nivaraPistacia vera24.316.9389.7788reverse complement
CNT30245953Oryza nivaraAvena sativa53.8773.3190.77195forward
CNT30369475Oryza nivaraOryza glumipatula33.9812.697.56123reverse complement
CNT30574986Oryza nivaraOryza barthii34.5312.2199.2125forward

Expression of CNT30116375

Sequence

>CNT30116375
GGGAAACCCACGCTTAGGGAAGGTGAGGTGAACTAACAACTCCTTCTGTCGTGTATCCTCGACTGACGCGGCCTCGGATGCTTCAATTGTAGATTTTAGT
ATTGAGCGAAAGGTTACACCTACAGGATAGGTTCTGTATTACAGGCTAATCCTACTCTACTAGTACTAATAGGTAGCATAGGGGATAAAAGCACTACACC
TAGAAATAGGAATCAACAAGAGAAAAACTTTGTTAGAAATTAACCCTTTCCTGATTGGTATCAGGGCTGGGAAGAATGGTTGGGATAACAAACAACCATC
AAGTTTGTACTTTGGATACCCCTATAACCATCAAAGATCGTTGAAGTGGCTAATTCCTCTAA