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Detailed information on CNT30116229


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596332Oryza nivaraOryza meridionalis57.0968.2291.87455forward

Expression of CNT30116229

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFYKFCYNFSRLSNTAFCKEPYYMSMHNIFP*

Sequence

>CNT30116229
GTTAATTGGCAATATGGCACCTCTGTATAGTGGTTCTTATTTTTAAGTCCTCGCGCAGGAGGCAACTATAGCCGCGAAGGGCAACTTTAACCATTACCAT
GTACAGGTAAATGGTTTGTGATACTCGAGTATAAACTATATGGTATATTTCTAAACCCTGATCGAGATGACGTGGTGTCATACGATCAGTTCCCCTTAAA
TACCTCGGGAACACCAGAACTCCTCTTGCTGCTGTTAACATTACGTTCAGAGCATATGAGGATACAAGTTCATGGAACAGGTGCGATAATTGTTAATGAC
TTAATGCTGGGCCATGACTAAAGCCGATAATTATCAGCAAGTCGTGGACTGCGGGTAAAGCGTACATCTGCTGTAGTAGAATATCTTTGAAACTATTCGA
ATAGCCGTGCTCATGGAGTTGAGTACCGGGACTCATATGGTACCCTGGTTAGAAATCTAAAGTTTATATGTTTTATAAATTCTGCTATAACTTTTCCAGA
TTGTCCAATACCGCTTTTTGCAAAGAACCCTATTATATGTCAATGCATAACATATTTCCATGATAACTTGCTGAGTATTGTGAATACTCATCCTTGCTCT
TATAACCCCTTTTTTAGATCTGGGTTAAGAGGAGGACCCATATGACTATTACTACGAAGACCCCGATAACTTAGAAAATCCCTGAGGGTTTTACCTCACT
AGTCAGAATGTATAGAAACTTCCGCTGTGTACTAATCAGATAGGGATTGATACATTAATCTCAGTCGGATCCAAGTTGTTAGTTTTGGGCTCCGACA