Detailed information on CNT30115856


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691057Oryza nivaraOryza sativa87.0973.3897.16317forward

Expression of CNT30115856

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MILLSKVLCRTCRGHLKFWSLFSRETYGARMVWIVWFISLLCYLIIACRGCPYFLGRL*

>peptide 2 (31 aa)
FNIVLAEYSLLTLVFNLVFRYLMTLIGMGRE*

Sequence

>CNT30115856
GTTCAATATTGTACTTGCTGAGTATTCTTTACTCACTCTTGTGTTCAATTTGGTTTTTAGGTACCTAATGACATTAATTGGCATGGGACGGGAGTAGCAC
CCTGGACTACACATTATTATTGCACATTATTAGAATTTAGTTTTAGACTATGATTCTGCTTAGCAAAGTTTTGTGTAGAACTTGTAGAGGTCATTTAAAG
TTCTGGTCCTTATTTTCGCGTGAAACTTATGGAGCTAGGATGGTTTGGATTGTGTGGTTTATATCGTTATTGTGTTATCTTATAATTGCCTGTCGTGGAT
GTCCATATTTTTTGGGGAGACTTTGACGAAATTTGTAATAATTTTGGGAGTTAGTGGTTTTGAG