Detailed information on CNT30115844


BLAST search results

BLAST vs Swiss-Prot:
sp|A8Y9D1|RR7_LOLPR, E-value = 2e-92

BLAST vs NONCODE:
NONOSAT000698, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Oryza nivaraOryza sativa74.7477.599.85651forward
CNT30677883Oryza nivaraSetaria viridis61.1935.7299.44533forward
CNT30617775Oryza nivaraSesamum indicum59.9378.8587.55522forward
CNT30730546Oryza nivaraCorchorus capsularis45.8167.5191.23399forward
CNT30406883Oryza nivaraBeta vulgaris7.4625.2990.7765forward
CNT30198866Oryza nivaraPisum sativum26.2970.2589.96229forward
CNT30300194Oryza nivaraTriticum aestivum75.231.1398.63655forward
CNT30384007Oryza nivaraTriticum turgidum49.9449.8399.08435forward
CNT30569656Oryza nivaraActinidia chinensis50.7552.4992.08442forward
CNT30543269Oryza nivaraBrassica napus67.6219.990.15589forward
CNT30509374Oryza nivaraSolanum lycopersicum11.024889.5896forward
CNT30556129Oryza nivaraOryza glaberrima20.5540.59100179reverse complement
CNT3059312Oryza nivaraArabidopsis lyrata20.0931.9391.43175forward
CNT30136937Oryza nivaraLolium perenne66.4891.6196.72579forward
CNT3018230Oryza nivaraZea mays66.1379.6798.96576forward
CNT30607385Oryza nivaraGossypium raimondii21.717.985.71189forward
CNT30230544Oryza nivaraAnanas comosus18.633.495.68162reverse complement
CNT30627895Oryza nivaraDaucus carota20.5558.8886.59179forward
CNT30153780Oryza nivaraPrunus persica47.8846.5988.25417forward
CNT30331679Oryza nivaraDioscorea rotundata55.3470.3692.12482forward
CNT30150659Oryza nivaraBrachypodium distachyon25.3794.4492.31221forward
CNT30578120Oryza nivaraOryza barthii13.5520.4996.61118forward
CNT30603929Oryza nivaraOryza punctata19.2942.1198.81168reverse complement
CNT30726938Oryza nivaraLupinus angustifolius20.988.3586.26182reverse complement
CNT3049028Oryza nivaraCucumis sativus20.0960.3490.86175forward

Expression of CNT30115844

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MDPCVYIPRFCSWINENVQELYLPLPFYESLPFCVWHPHPLWQHLLIRNLI*

>peptide 2 (72 aa)
MAPPPPLAASTNSELNLKAIFRPGRFWDASNNQRMASALPCLDPISIGTFRVDPFLLRLVFTPILGVTLRIA*

>peptide 3 (37 aa)
MLTNRLRKIGSDFAVLFSAVPRRDMSVKEVQESVFFL*

>peptide 4 (39 aa)
MISVFSFFSFLFVSRKISSDSPSIDSFPIEMYGSMCLHT*

>peptide 5 (29 aa)
MCKSSICLCHSMSRFLFAYGTPTPFGSIY*

>peptide 6 (30 aa)
PDHELVTASNLRKVPIVSIFGMGYLRNPHE*

Sequence

>CNT30115844
GCCAGATCATGAATTAGTAACTGCATCCAATCTCCGAAAAGTCCCGATTGTTTCGATTTTTGGAATGGGATATTTACGGAATCCCCATGAATAGGATCAA
ACCTTATTCCATGCTATTTCCATAAGATTCCTCTTTCTTATTCTTAAGCAAGCCCCCGAGAGGGCTTAGTTGATCATGATTTCTGTTTTCTCTTTCTTTT
CCTTTTTGTTTGTTTCGAGAAAGATATCGTCCGATTCTCCTTCTATTGATTCTTTTCCGATCGAGATGTATGGATCCATGTGTCTACATACCTAGATTCT
GTTCATGGATTAACGAAAATGTGCAAGAGCTCTATTTGCCTCTGCCATTCTATGAGTCGCTTCCTTTTTGCGTATGGCACCCCCACCCCCTTTGGCAGCA
TCTACTAATTCGGAACTTAATTTGAAAGCCATATTTCGACCCGGACGCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAG
ATCCTATTTCAATCGGAACTTTCCGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCTATATTGGGAGTTACTCTACGTATTGCTTGACGTAAAAC
CAATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCACGGCTCGATAGAGAATTTGATAAGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTA
ACCACCATGTTAACTAATCGATTACGAAAAATTGGATCGGATTTTGCAGTTCTTTTTTCTGCAGTACCTCGACGTGACATGAGCGTGAAAGAGGTTCAAG
AATCCGTTTTCTTTTTATAAGGGCTAAAAACGAATCACTTATTTTTTTGGCTTTTTGACCCCATATTGTAG