« Back to Oryza nivara search


Detailed information on CNT30115817


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690383Oryza nivaraOryza sativa79.858.9699.49395forward
CNT30595633Oryza nivaraOryza meridionalis44.0467.0897.71218forward
CNT3099912Oryza nivaraOryza rufipogon100.444.399.2497forward

Expression of CNT30115817

Sequence

>CNT30115817
AGCCAAGTTAATATGAATTAATAAGATGGTAGGATTAGAATTACGTACTCTCGATCATATATAGCCTCTGCTTGCATGCAGCAGGAGTATAGTATATAGT
TAAGACAAAGAAAATGTATATAAATAAGATTTTGCGATTATGTAAGGAATTTTATTTAGGGGCCAGGCGGCAACATGACATACATGAGACGCTAAGGTAG
CTAGCTAGCTAGCTAGCAGCAAATTAAGGACTTGCATGCAAGCTAGGTAGCTAGTACATGGCATATGTAGTGGTACTGGTAGCTCGTTGATCAGGTGATG
AATTGGATGGAGATAAGTTTCTTCTAGTTGCAGTTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCAGCTGGAGCCGCATCCGCAGTTGCCACCGC
AGCACGACATGGTGATGATGATGAGAGCTTCTTCTTCCTTCTCTGGCCTTGTCGGCAACTAGCTGCTGCTTACTTGTATGGAGCTTCTCAGTTGC