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Detailed information on CNT30115771


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110171Oryza nivaraOryza longistaminata28.0514.7184.06138reverse complement

Expression of CNT30115771

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LLANLRERGRRDDGIHAGGEVVTRSDASVAADG*

>peptide 2 (42 aa)
MREGGGEMTGSAREGKRSPDPPLPSPPTADPCERGANSRWDM*

>peptide 3 (62 aa)
MGYVREGKRSLDPPLRSPPMPPSPKQPPPIISLESRRMPKSKSYEEESHGDPVSERAGGRRD*

Sequence

>CNT30115771
GCTACTGGCAAATCTGCGCGAGAGGGGGCGGAGAGATGACGGGATCCATGCGGGAGGGGAAGTGGTCACAAGATCCGACGCTTCCGTAGCTGCCGATGGC
TGATCCATGCGAGAGGGGGGCGGAGAGATGACGGGATCAGCGCGGGAGGGGAAGAGGTCACCGGATCCGCCCCTCCCATCGCCGCCGACGGCGGATCCGT
GCGAGAGGGGAGCGAACAGCCGATGGGATATGTGAGGGAGGGGAAGAGGTCGCTGGATCCGCCCCTCCGATCGCCGCCGATGCCGCCATCACCAAAACAG
CCACCACCGATCATTTCGCTGGAGAGCCGCAGGATGCCCAAATCCAAGTCCTATGAGGAGGAAAGCCATGGGGATCCAGTGAGTGAGAGGGCAGGAGGGA
GGAGGGACTGAGGGAGAGAGTTGTTTGGTCTGGGTGAGTGGGAGGGGAGGAGGGAGAGAGTCAAGGAGAGACCGTTAGAAACTGGGAGAAAT