Detailed information on CNT30115689


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690756Oryza nivaraOryza sativa61.0487.2898.99199forward
CNT30552458Oryza nivaraOryza glaberrima99.6910098.15325forward
CNT30369262Oryza nivaraOryza glumipatula94.1795.9498.7307forward
CNT30574974Oryza nivaraOryza barthii47.2436.6799.35154forward
CNT30603466Oryza nivaraOryza punctata53.0745.6595.38173forward

Expression of CNT30115689

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MILFRHLPTPKVNGVKILGGLHGGGVDDVD

Sequence

>CNT30115689
CAAAAGATGGAAAAACCTTAAACCTCACTAGACATTGCAGACCATAACTCGAGAAACCAGAATTGATGCCTGATTCATCAGACTGATATGCCAGCAAGAA
TAGGTGAAGGGACCAGTGAAATCTGATCTGAAACTCACATGATAATAACTCACGACAAAAGGAGCTAAACATTATTGGTATGTAGTATGTTCAGTGGTGT
GCATTATTAGCATTGCTCAAGCTGCAGAAAAAGGTATGATCCTCTTCAGACATCTTCCCACGCCAAAGGTGAATGGGGTGAAGATCTTAGGCGGACTTCA
CGGTGGCGGAGTTGATGATGTCGATG