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Detailed information on CNT30115673


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LXA5|LRK91_ARATH, E-value = 8e-13

BLAST vs NONCODE:
NONORUT005096, E-value = 1e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693305Oryza nivaraOryza sativa30.693.9784.48174forward
CNT30106343Oryza nivaraOryza longistaminata30.6915.6682.18174forward
CNT3099647Oryza nivaraOryza rufipogon30.3439.8183.14172reverse complement
CNT30577376Oryza nivaraOryza barthii25.0419.2784.51142forward

Expression of CNT30115673

Peptides detected in this lncRNA

>peptide 1 (32 aa)
TKLQLLEFKSLALLLWWSYKHYYFMIKLILNL*

Sequence

>CNT30115673
CACAAAACTACAACTTTTAGAGTTTAAATCCCTAGCACTATTGTTATGGTGGAGCTATAAACATTATTACTTTATGATTAAATTGATTCTAAACCTGTAG
TTTTATTATAATTTAGTTACTAAACGTGTAGTTTTGTGACACTTCATCTTAAATGTGTAGTTTTGTGATAAATTTGGAGCTAAATGTGTAGTTTTATGAT
ACAACTCCTTAAATCTGTAGTTTTGTGATAGTTTGGTCATAGTATCTGTAGTTTTGTGAAATTTACTCAAAATCTAGATATGACAAAAGTTGTCTTGCTA
TACTTATCCTATGAGTGCGAAAACTTGCCACCCTAGCGAGGTGTGATTGATGTTAGTGTCAAACTTGAGGATGACATTCCTGTCGATGATGAAAGTTGCC
CCTCCGACGAGGCCATAGGCGGTGCATATGTTGGCACGGGCATCTTGGATGGTAACACTGGTAGTGGTCCATTGGATTGGAGGACCGTCATGGCAGCTCT
GATAGATGGACGCGCGTATCGGTCCGGATGTGCACACCAGAGTCCAACAGCCATGACACACTCCATG