Detailed information on CNT30115627


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SY97|LHCA3_ARATH, E-value = 5e-75

BLAST vs NONCODE: nothing found

Expression of CNT30115627

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKGAFLEEEDLETEDCNGLPSSCLPERRA*

>peptide 2 (31 aa)
MASPAAASQREEPEPPLLSLSKLKLLLLFPS*

>peptide 3 (30 aa)
DKLANRSMRPCVQISWSTNLHVTPTPYTHA*

>peptide 4 (73 aa)
RQASKSIHATMRANQLEHKFTCYTHTLHPCIIIHRIYVRTYIPLSITRTIDRTKLRTYIRTHIYAYARTYIHN*

>peptide 5 (50 aa)
MKFSWIRLVPTILIKLLFFLKRMNFTVDSYKNSSKIVSDEALTPLLLQHE*

>peptide 6 (32 aa)
MNPPSPGSLHPSMIPCTHDQYYGSHGIFTNEI*

>peptide 7 (72 aa)
MASLPFLISLSLSSFISASLLVPKPSGLKSGPPGYFSRPRKYCFPMEPGVYQSWKRRCSAKPTRASSKTKRV*

>peptide 8 (51 aa)
MLHPHPTPMHNNTSYIRTYIHTPLDHTHHRSYKVAYIHTYTHIRIRTYIHT*

Sequence

>CNT30115627
AGACAAGCTAGCAAATCGATCCATGCGACCATGCGTGCAAATCAGTTGGAGCACAAATTTACATGTTACACCCACACCCTACACCCATGCATAATAATAC
ATCGTATATACGTACGTACATACATACCCCTCTCGATCACACGCACCATCGATCGTACAAAGTTGCGTACATACATACGTACACACATATACGCATACGC
ACGTACATACATACATAATTAAAAACTCGTAATTAATTAAATACGTAGTTGATGGCATCTCTAATGGAACTTGAGGCTGGTTCTGCACGGGGCCAACCCC
GGTGAAGAGCGCCTGGACGGAGAAGCCGAGGAAGGCGAGCATGGCGAGCCTGCCATTCTTGATCTCCTTGAGCTTGAGCTCCTTCATCTCCGCCTCGCTC
TTGGTCCCGAAGCCGAGCGGGTTGAAGAGCGGGCCGCCGGGGTACTTCTCGAGGCCGAGGAAGTACTGCTTCCCCATGGAGCCCGGCGTGTACCAGTCCT
GGAAGCGGCGGTGCTCGGCGAAGCCGACGAGGGCGAGCTCGAAGACGAAGAGGGTGTAAGGGTCGGCCCAGTAGGTGTAGGTGCCCGCGGGGGGGATCAC
GCCGGTCTGGAACCACGGGATCGCCGTCTCGGCGGGGACGAGGCCCAGCTTGCCGAGGAGCTCCGGGGCGACCATGCCGACGACGCCCATCATCGCCGTC
CGGCCGTTGAACACCTCGCCGTAGGCCAGCCACCGTGGCTCGATGAACCCGCCGTCTCCCGGAAGCCTGCATCCATCCATGATTCCATGCACGCACGATC
AATATTATGGAAGCCATGGCATATTTACAAACGAGATATAATTTGTGAATAAAAACTCTAGAAGCAAAGGCTAAAAAATAAACTTCAATAAAAAAACATG
AAAATTAGCTCTAAATTTAAGATTAAAAATTTAAAGTTTCGCTGATAAGTATAAGCATAAACGAAAAGATGAGGTCCGTAGACGATAAATCATGCGGTTA
TGTGCCATAGGTCATCTTTGACCATAAAAGTAAAGGTTCTCTGAAATTTACTCTTTATTTATTTATTTATTTATTTGGAAGGTCTATTGATTATTGTTTC
CTATGAAAAGTTTGATCATTTTGATTGTACTACTGTACTATGAAATTCAGTTGGATACGGCTAGTTCCTACCATCTTAATTAAGCTCCTTTTTTTTCTGA
AACGCATGAATTTTACGGTTGATTCCTATAAAAATTCTTCGAAAATCGTTTCAGATGAGGCCTTAACGCCTCTTTTATTGCAACATGAATAAATTTTACC
ACATGAAAACTTACGTGCCATCCAGGTAGCTCAGGGACTGCTTGGATGCGAACCACAGCTGCCTGTCAGCACCTTGCTGAAACCAAACCAAACCAAACAT
AAATTTAACCAGATCAGCATAATATCTTTCAATTTGAATTGCGCAAGAGTAGAAATCAATCAGCATATATACCTTGGCAGGGGGAGTGGCCTCTGCCCTG
ACCATGAAGGGTGCCTTCCTGGAGGAAGAAGACCTGGAGACTGAAGATTGCAATGGCCTCCCCAGCAGCTGCCTCCCAGAGAGAAGAGCCTGAGCCGCCA
TTGTTGTCTCTCTCCAAGCTCAAGCTCCTCCTCCTCTTCCCAAGCTAGCAGTGGTGAGCTGAAATGTGTGCTCCAAATTAAACTTGGTGAGTGCTAGAAA
AGGGGGATGAGG