Detailed information on CNT30115468


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 3e-96

BLAST vs NONCODE: nothing found

Expression of CNT30115468

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MRREGSRGLSRGSLFPIHPEGFFPSLAPSSYPVLLSAQPYLFISIFLLFYFLISLLVHRS*

>peptide 2 (56 aa)
MGSLETNRRFLHFDPGPPEMENPKDMFETWLRVRRSPFRCWTWNLNKDEYSVLNSD*

>peptide 3 (75 aa)
MPPGRKERGRHSLSFLNRSDHFSHSLLFVWWGPGLVRFLLLSTQFSVFVRDHLRRKDRYQFCGGAAVKGRFPLFH*

>peptide 4 (61 aa)
MEEPSKPVPDDDAPWAKGKGPPFSFFPQSFRSFLSFPFVCLVGPRVGSFPPPIYAILRLRS*

>peptide 5 (86 aa)
MRKKDRRAGFVASGEFILGKKGEGSHQSYAKGRKSWAEPGVTFPDPSRRFFSLSRPIIVPSPAIGSALSIHLYFFTFLFFDLSSCS*

>peptide 6 (76 aa)
MFATVLFSTVSDFLIFLVRKKSLLHKYSPLLALVSGATGGIRAAREEAVAVVELVLHTLLDKEGKARRISTGEKVI*

>peptide 7 (94 aa)
MQKGAAGNRFCREVGHKVFICAKKRLLKPAQREKMEKECPFILPKKAIKFEKEIDKFLVVKASENLMAAGRRGVGTSLLLARRMEMAGEEHGGK*

>peptide 8 (90 aa)
MVGAANSDSARISFFGSTKGELAQKLDRGKDAAGGRRLIQVPPEPREMVAYYTAHKLCLGWGYLLFVGGTYGARRASVCCVDCLCISYRV*

>peptide 9 (54 aa)
MLKLAGVRGRWNSYLPHFFLHFQLEEEEASLFASSIDRKKDLDLKPSTKERESW*

>peptide 10 (52 aa)
MHFLQSVMEPSSAPPSQKERKEQNSRRRRVEYSQGAFVVRKGPNGRPCSEVH*

>peptide 11 (30 aa)
KELGVGAYITGSLLTKPSWQAPTVLLLFLT*

>peptide 12 (32 aa)
MKDDLESTQEDRESHIREKVTNGVEPSNIAKA*

>peptide 13 (34 aa)
MIVGSTLKLTYSLGQSSECVRDTIRAQYLNSTLV*

>peptide 14 (37 aa)
MFLKQVLQTIVLTSHSPPKVPELFLVHMQPELCCSLI*

>peptide 15 (41 aa)
MELNQVTLQRHNDSRIHFEVDLFARPIVGMCTRYHKGPISQ*

>peptide 16 (49 aa)
MGESRFLVEFQSPRLLRWGPLKRIEGFFTLTPDPRRWRTLRICLRHGSG*

Sequence

>CNT30115468
GAAAGAACTGGGAGTTGGCGCCTACATAACAGGTAGCTTGCTTACCAAGCCGTCCTGGCAAGCTCCTACAGTTCTCTTATTATTCTTGACTTGACTTATT
AATAAGAAAACTGCTCACTAACAAAATGAAAGACGATCTAGAATCTACCCAAGAAGATAGAGAGTCCCACATACGAGAAAAGGTCACAAATGGAGTTGAA
CCAAGTAACATTGCAAAGGCATAATGATAGTAGGATCCACTTTGAAGTTGACTTATTCGCTCGGCCAATCGTCGGAATGTGTACGAGATACCATAAGGGC
CCAATATCTCAATAGCACCCTTGTCTAAAGCTTCGAATGAGACTGAATATCCGAAACGCAGGAACGATCTGACTAGAAAGTCATTCAAAACTTGATCGAA
GAACCAGCGTTTATTGAAGAAGCTATAGAGTCGATTACAAAAAGTACTAGTTTGAAAGGCTCGTTGGAATTGATCCGCTACGAGATTGACATTATACGCT
AGAGAAGCACCTGAAGTACTAAACAGAATAGGTATTAGTTTTGTAATGGTTGGAGCAGCAAACTCGGATTCGGCAAGAATCTCATTTTTTGGTAGTACGA
AGGGGGAATTGGCCCAAAAATTGGATAGGGGTAAAGACGCAGCCGGGGGCCGGCGGCTTATTCAAGTGCCCCCCGAACCGCGCGAAATGGTCGCCTATTA
CACGGCTCACAAACTCTGCCTGGGGTGGGGCTACCTATTATTCGTAGGCGGTACGTACGGCGCACGCAGGGCCTCGGTTTGCTGCGTGGACTGTCTATGC
ATTTCCTACAGAGTGTAATGGAACCCAGCTCAGCTCCGCCGAGCCAAAAGGAAAGAAAAGAACAGAACAGCCGGAGGCGAAGAGTAGAGTATAGCCAAGG
GGCTTTCGTCGTCCGTAAAGGACCTAACGGAAGACCGTGCTCCGAAGTGCACTGAGAGTTTTGTTTTAAGAACACTTGGCCTTACCCCTTCGTTTTGAGC
CATGTAATCGGCAAGATTGAACCGAGGCCCGCCCGGGCACCGCCGGGGGGACAACCAGTAGGCTTTCTTTCCGAAGTTTCCTCCCGGGGCCCTTAAATCA
TTGAATTCATAGGCATAAGGGCGTCCCAGGCAGTGGTTCATTCAATGAGAAAGAAAGACAGGAGGGCAGGATTCGTCGCGTCGGGCGAATTCATTCTGGG
AAAAAAGGGGGAAGGGAGTCACCAGAGCTATGCGAAGGGAAGGAAGTCGTGGGCTGAGCCGGGGGTCACTTTTCCCGATCCATCCCGAAGGTTTTTTTCC
CTCTCTCGCCCCATCATCGTACCCAGTCCTGCTATCGGCTCAGCCCTATCTATTCATCTCTATTTTTTTACTTTTCTATTTTTTGATCTCTCTTCTTGTT
CATAGATCTTGAAAGCGGATCAATAGAAATTTATCAAAGGATCTATCTATAGAAAGATCTAGATCTCTATCATCATCTATCTCTATATCTAAATATGGAA
GAACCCTCGAAGCCTGTCCCCGACGACGATGCCCCCTGGGCGAAAGGAAAGGGGCCGCCATTCTCTTTCTTTCCTCAATCGTTCCGATCATTTCTCTCAT
TCCCTTTTGTTTGTTTGGTGGGGCCCCGGGTTGGTTCGTTTCCTCCTCCTATCTACGCAATTCTCCGTCTTCGTTCGTGATCATCTTAGGCGAAAGGATA
GGTATCAATTTTGTGGAGGGGCGGCTGTGAAAGGGCGATTCCCCCTTTTCCATTGAAGTAGGGAAGGGGGTGATTGATCTTTTTTGAATCAGGCCTTACT
GACCAAGTGGTGGTATAAGCTTCATTGCGGATGAAAAGAAGTCCTTGTGAGCGGAGCTACAAAAGGAAGTTCAAGCTCAAGAAATCCTCTCAATAGGGAT
TGGGCAAGCAAGCTGTTTGTTTATTTGATCTTACCCGGTTGTGAGACGGGACGTGAAGTCAACCAAGTACATGTGTGTTCATAGTGTCCCCGGCACCTTC
CTCCTAGCTGAGTATGGATGCTGAAGTTAGCTGGAGTGCGTGGTAGATGGAACTCCTATTTACCGCATTTCTTCTTGCACTTCCAACTTGAAGAGGAAGA
AGCATCTCTCTTTGCATCTTCAATAGATAGGAAAAAGGATCTTGACCTGAAGCCTTCGACCAAAGAAAGGGAGAGTTGGTGAAGTCAGAGGTGTTCCCTA
GATTCATGGAAGGACTTTTTGACTCTAAGGTTTAAAATTGATCGAGAAATGAATGATGAGTTGTTTAAGTTCCTGCTGAATCCACTATTATCGATGTAGG
TAGAAAGGGCATAAAGCCACGGAATGCAGAAGGGAGCAGCAGGAAATAGATTTTGCAGGGAAGTGGGGCATAAAGTGTTTATCTGTGCCAAGAAAAGGCT
ATTGAAGCCGGCCCAGAGAGAAAAAATGGAAAAAGAGTGTCCTTTTATTCTCCCAAAAAAGGCGATCAAGTTTGAGAAGGAGATAGATAAGTTCCTTGTG
GTCAAAGCTTCGGAAAACCTCATGGCGGCCGGCCGACGTGGAGTGGGAACTTCACTACTACTGGCGCGACGGATGGAGATGGCTGGCGAGGAGCATGGGG
GAAAGTAGATTCTTGGTTGAATTTCAAAGCCCTAGGCTCTTGAGATGGGGTCCCTTGAAACGAATAGAAGGTTTCTTCACTTTGACCCCGGACCCCCGGA
GATGGAGAACCCTAAGGATATGTTTGAGACATGGCTCAGGGTGAGAAGGTCCCCGTTCAGATGTTGGACGTGGAATCTCAATAAAGATGAGTATTCTGTT
CTCAATTCCGATTGAATGGACATCTGTTTTATTTCAAGAAGATCCCCAAGTAAGGCACTAGTCTCATATTCTATGAATGCCCACAATCGCTTGTGAAAGA
ATCAGCTCTTCTTTGCATGTTCGCAACTGTCTTATTTAGTACTGTTTCAGATTTCCTGATTTTTTTAGTGCGAAAGAAATCGTTGTTACACAAGTATTCA
CCCTTGCTTGCTCTCGTAAGCGGTGCTACAGGTGGAATAAGAGCTGCTCGAGAAGAAGCTGTAGCTGTGGTTGAGCTAGTGCTTCATACCTTACTGGACA
AGGAAGGAAAGGCAAGGAGGATCAGTACGGGAGAGAAAGTGATTTAAGAATGTGAATTTGATTTGATAAGTAATCAAGGCAATTAGCTTAGGTTCATCCC
GAATCCATTCCATGTTTCTTAAACAAGTCCTTCAAACCATCGTGCTAACAAGCCATTCTCCTCCGAAAGTCCCAGAGCTTTTTCTGGTCCATATGCAGCC
TGAACTGTGCTGCTCTCTGATTTGATTCACTTCCTTTCCATCTCCTCTCCTCGCTTTAGTAGGTTAGGCGAGCGGCTTAATACTTCTCTGCTCAGAGTCA
AAGAGGCAAAGTGCTAACTAAACTACTAAGGAAAGAAATTCCATTCCCTAGG