Detailed information on CNT30115277


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567603Eutrema salsugineumActinidia chinensis80.360.3595.62799reverse complement

Expression of CNT30115277

Peptides detected in this lncRNA

>peptide 1 (39 aa)
ALLLIEAWLLPRRPGIGRALQRHPFSGLVDSAGELLHTP*

>peptide 2 (37 aa)
MAHLELSIPYDGSTKQPPRPTYLKFENRSRALRPRCL*

>peptide 3 (66 aa)
MSDSLVRVSRRVEWGAHRPTPGARRCRGTPLRRVLQTTIKAATSPRAYQGPGLGHHLNPRRNASNS*

>peptide 4 (54 aa)
MVRLVFRPYTQVRRTICTSVSLRASTRVSSGFARSGIVHHLSGPDRHAHTRTLL*

>peptide 5 (34 aa)
MHQIPEFMTNSETKDQILGNRVHRVGVILSVSIAI

>peptide 6 (29 aa)
RPPTHRGLALAPTAGYRSRASAPSIFGAS*

Sequence

>CNT30115277
GCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGG
TGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAG
TTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCTTATGACGGCTCAACA
AAGCAGCCGCCACGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGTT
TCCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTG
CACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACT
CGAACCCTTCTCTAAAGATCAAGGTCGGTCGGCGGTGCACCCGTGAGGGATCCCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTGACTC
GCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGACGCCCGGAGCACGCAGATGCCGAGGCACGCCGTTAA
GGCGCGTGCTGCAGACCACGATTAAGGCAGCGACGTCTCCGCGAGCGTATCAAGGCCCGGGCTTAGGCCACCACCTTAATCCGCGTCGGAATGCATCAAA
TTCCTGAGTTCATGACGAACAGCGAGACGAAGGATCAGATTCTAGGCAACCGAGTGCACCGCGTGGGAGTGATCTTGTCTGTGAGCATAGCTATA