Detailed information on CNT30115267


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021658Eutrema salsugineumCitrullus lanatus94.12100.0696.41776reverse complement
CNT30309594Eutrema salsugineumCamelina sativa96.0893.8498.511813reverse complement
CNT3083352Eutrema salsugineumBrassica juncea96.6699.3598.521824reverse complement
CNT3036478Eutrema salsugineumCucumis melo94.2258.4996.231778forward

Expression of CNT30115267

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MHPFQKSGFVARISSRITTVIRVVVTIKQTITDLMSHSQFHSLNSFILTHAWLNLETSI*

>peptide 2 (43 aa)
MIRFSGLLATSQTANHPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 3 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQHNRIEIL*

>peptide 4 (32 aa)
MKYECPRLSLLIITPIPKANTIGSKSYNVIPC*

>peptide 5 (38 aa)
MINRSRVVLFLTGIDNDPSAGSPTETLLRLLLPLNDKV*

>peptide 6 (30 aa)
MMRRQHKGLAIRRVIMNHQSNGQSPRRPFI*

>peptide 7 (47 aa)
MLAVRRTGRPIPRFNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 8 (45 aa)
MLMYTERRLALSTLISSITAPEARPGQLRPGAYRRPKGQADKCSP*

Sequence

>CNT30115267
GGGATCAGCTAAGAAACCGGCTGGCCGAGAGTGATGATTAATCGTTCTCGGGTCGTTCTGTTTTTGACAGGTATCGACAATGATCCTTCCGCAGGTTCAC
CTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCAGACGGCGAACCACCCACGTCGCCGCGATC
CGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGG
ATTCCTCGTTGAGACCAACAATTGCAATGATCTATCCCCATCACGATGAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAATAC
ATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACATGTTATTGCCTCAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGG
CCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATG
CACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAG
GCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGC
CAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGT
TCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCG
ACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTG
CTTTGAGCACTCTAATTTCTTCAATAACAGCGCCGGAGGCACGACCCGGCCAGTTAAGACCAGGAGCGTATCGCCGACCGAAGGGACAAGCCGACAAATG
CTCGCCGTGAGGCGGACTGGCCGACCCATCCCAAGGTTCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCG
GCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTATTTA
TTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC
CTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCC
TTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGT
TGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGTTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTG
AATTCGTTCATACTTACACATGCATGGCTTAATCTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCATTAATC