« Back to Eutrema salsugineum search


Detailed information on CNT30115266


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374088Eutrema salsugineumArabidopsis thaliana100.1153.4497.25909reverse complement

Expression of CNT30115266

Peptides detected in this lncRNA

>peptide 1 (47 aa)
HLRYLLTDVPPQPNSPPDNVLRPDRPAEASLGSKRRGCYPASDSRSK*

>peptide 2 (80 aa)
MCRPSQTPHLTMSSARIGLPKQALGPKEGVVTPPPIHGVSKITLKVVVFHLRRSSHLSYTSQVISQSRTRVKLNRVFFPR*

>peptide 3 (31 aa)
MSTTGRERHSVLRIFKGRRECTGHHATCGALP

Sequence

>CNT30115266
GACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATCGGCCTGCCGAAGCAAGCCTTGGGTC
CAAAAGAAGGGGTTGTTACCCCGCCTCCGATTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATCCTA
CACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTC
GCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGATCATAGTTA
CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAA
TGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGCTGACTGTTCGACGCTCGAGGAAAGCTCCCGAAGGAACCATTCCCACT
CCGTCCCCCGGCCGGCACGCGGCGAACCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCGGAAGAGGGACCCCCGAGCCCA
GCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACC
TGATGCGGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGAATGCACCGGACACCACGCGACGTGCGGTGCT
CTTCCAGC