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Detailed information on CNT30114931


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-138

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379426Eutrema salsugineumManihot esculenta78.1874.8782.93867forward
CNT30630785Eutrema salsugineumVigna unguiculata61.2379.685.27679forward
CNT30169898Eutrema salsugineumPistacia vera82.0651.6883.3910forward
CNT30636126Eutrema salsugineumCapsicum annuum82.2449.4383.88912forward
CNT3089455Eutrema salsugineumVigna radiata81.1574.0183.78900forward
CNT30542695Eutrema salsugineumBrassica napus81.9758.7685.48909forward
CNT30233220Eutrema salsugineumBrassica oleracea68.5398.0686.84760forward
CNT3061767Eutrema salsugineumArabidopsis lyrata79.4453.9582.52881forward
CNT3073349Eutrema salsugineumBrassica juncea82.7882.5587.47918forward
CNT30264722Eutrema salsugineumBrassica rapa81.9785.9286.8909forward
CNT30613113Eutrema salsugineumArabis alpina62.5875.5285.73694forward
CNT30217431Eutrema salsugineumKalanchoe fedtschenkoi81.9767.1383.83909forward
CNT30426314Eutrema salsugineumPapaver somniferum81.9772.7883.17909forward
CNT30704854Eutrema salsugineumPrunus avium82.651.3784.72916forward
CNT30643414Eutrema salsugineumCannabis sativa79.4483.7583.88881forward
CNT30120507Eutrema salsugineumCitrus clementina82.0683.6482.75910forward
CNT30595410Eutrema salsugineumEragrostis curvula79.7164.8183.03884forward
CNT30174705Eutrema salsugineumVigna angularis81.7958.6384.45907forward
CNT30111644Eutrema salsugineumFicus carica79.8962.1884.09886forward

Expression of CNT30114931

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVIVLPVRVFTKICIPPRRRRTK*

>peptide 2 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVIVFPVSVFTKICIPPRRRRTK*

>peptide 3 (60 aa)
MKGRLLLYVVVSESSTVLELLSGKDQPLLVRWDSLLVLDLSLDIVDGIRTLHLECDRLSR*

Sequence

>CNT30114931
AGGACAAAGGGCCAATGGCAGTCCAATATAGAGAAATACGATATGTCTTAGAACAAAAAGAGAAAAGGAAGCCATCATAGTTCATCAATTATTTAACTGG
AGGCTTTAGAAGCCCCCAAAACACAAACAACGAGAAGTTTTAGAAACACGAAACGACTTTTGAAAACATGATAAAGTAACCAGGCGCAAGTTTTTAGAAA
CCACCACGAAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCAAGTGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGA
GACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACCTCGAGGGTAATTGTCTTTCC
GGTGAGTGTCTTCACAAAGATCTGCATACCACCACGCAGACGCAGAACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAATCCGCCAAGGTACGACCA
TCCTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGC
TTTCAACCTCGAGGGTAATTGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGAACCAAGTGAAGGGTCGACTCTTTCTG
AATGTTGTAATCAGCTAGTGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTA
GCCTTAACGTTGTCAATAGTGTCCGAACTCTCGACCTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTAACGAAGATCTGCATACCACCACGGAGCCTGA
GGACTAGATGAAGGGTCGACTCCTTCTGTATGTTGTAGTCAGCGAGAGTTCTACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGG
TGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTATCAGAACTCTCCACCTCGAGTGTGATCGTCTTTCCCGTTAGGGTTTTGACG
AAGATCTGC