« Back to Eutrema salsugineum search


Detailed information on CNT30114853


BLAST search results

BLAST vs Swiss-Prot:
sp|A4QL79|TI214_DRANE, E-value = 1e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30237621Eutrema salsugineumBrassica oleracea24.445.7793.1888forward
CNT3062643Eutrema salsugineumArabidopsis lyrata24.441.9592.0588forward
CNT30262672Eutrema salsugineumBrassica rapa24.441.2393.1888forward

Expression of CNT30114853

Peptides detected in this lncRNA

>peptide 1 (63 aa)
LLIIESFLVSFNSYISLRPNNEVRLRFERFFIFLFRKSKFLLIQFLIFFAIFTKNCCSFFENP*

Sequence

>CNT30114853
ATTACTCATTATTGAATCTTTTTTAGTTTCATTTAATTCATATATTTCTCTCAGGCCAAATAATGAAGTTCGATTGCGTTTTGAAAGGTTTTTTATTTTT
CTTTTTAGAAAAAGCAAGTTTTTGCTAATCCAGTTTTTAATTTTTTTTGCGATTTTTACGAAAAATTGTTGTTCTTTCTTTGAAAATCCTTAAAACCAGA
AAAGACTTAGTTTTGAATTTTTGACTCTTTTTTTAATTCTTTAAAAATAGGTTAAAAAAAAAGGCTTTTTTTCAGAACCGAACGATACGTCAGTTTCCAG
TCCCAAACTGTTAAAAAACAAAAATTATTTTTTTTTCCTTGTCTTTTGTTTTTTTTAGTC