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Detailed information on CNT30114771


BLAST search results

BLAST vs Swiss-Prot:
sp|P85112|KPPR_VITSX, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691096Eutrema salsugineumOryza sativa35.0813.9385.07134forward
CNT30670674Eutrema salsugineumSetaria viridis20.9411.2787.580forward
CNT30513083Eutrema salsugineumJuglans regia43.9838.2782.74168forward
CNT30373358Eutrema salsugineumArabidopsis thaliana5037.6787.96191forward
CNT30628885Eutrema salsugineumVigna unguiculata40.5837.0881.29155forward
CNT30708150Eutrema salsugineumGlycine max41.3629.1581.01158forward
CNT30565281Eutrema salsugineumActinidia chinensis36.6529.9182.86140forward
CNT3087966Eutrema salsugineumVigna radiata40.5828.3980155forward
CNT30552726Eutrema salsugineumOryza glaberrima35.0826.9685.07134forward
CNT30145996Eutrema salsugineumMedicago truncatula37.735.2183.33144forward
CNT30686133Eutrema salsugineumTriticum urartu20.94328580forward
CNT30595838Eutrema salsugineumOryza meridionalis35.0827.0785.07134forward
CNT30644238Eutrema salsugineumCannabis sativa17.5425.1985.0767forward
CNT30575421Eutrema salsugineumOryza barthii35.0818.6685.07134forward
CNT30116076Eutrema salsugineumOryza nivara35.0818.6685.07134forward

Expression of CNT30114771

Peptides detected in this lncRNA

>peptide 1 (90 aa)
IINRFLDGDTTLESFDLLIHKIKVIGAWVQSSDSFLFATSPVQGMVVVETDHSGRVTDECVGIGVPAFRCFCRIRSRRRVRSRWFVVRRK*

>peptide 2 (67 aa)
MSVLESGFPPFGAFAASGVGGESDHDGLLCGASDDCVESTVGLGLTTVEEDLFRGGRRWRRERKGER*

Sequence

>CNT30114771
ATTATAAATCGGTTTCTCGACGGCGACACCACTCTTGAGAGCTTTGACTTGCTCATACATAAGATCAAAGTCATTGGCGCGTGGGTCCAAAGCAGTGACT
CCTTTCTCTTTGCGACCAGTCCTGTCCAAGGAATGGTAGTCGTCGAGACAGATCACAGTGGTCGTGTCACTGATGAGTGTGTTGGAATCGGGGTTCCCGC
CTTTCGGTGCTTTTGCCGCATCCGGAGTCGGCGGCGAGTCCGATCACGATGGTTTGTTGTGCGGCGCAAGTGATGATTGTGTTGAATCTACGGTTGGTTT
GGGATTGACGACGGTAGAAGAAGACTTGTTTCGAGGAGGAAGAAGATGGAGAAGAGAAAGAAAAGGAGAGAGATAGAGAGAA