Detailed information on CNT3011466


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000283, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193763Zea maysSecale cereale98.6100.2896.881763forward

Expression of CNT3011466

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLQKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 2 (34 aa)
YLVYPASSHMLVSKIKPCMCKYELIRTVKLRMAH*

>peptide 3 (38 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEPSLRS*

>peptide 4 (30 aa)
MVARLKLKGIDGRAPPGPDIARIDRLRALS*

>peptide 5 (33 aa)
MPTRDQRVLLIGPRWHLMRNQSLWVPGGVWSQG*

>peptide 6 (56 aa)
MPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGSRRRGWFAAPDVARSPLNLII*

Sequence

>CNT3011466
TACCTGGTTTATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTC
ATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGAGAGGGGC
GCATTTATTAGATAAAAGGCTGACGCGGGCTCTGCCCGCCGATCCGATGATTCATGATAACTTGACGGATCGCACGACCTTCGTGCCGGCGACGCATCAT
TCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTG
AGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCTTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCGTTAG
TGTCTGGTAATTGGAATGAGTACAATCTAAATACCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGC
GTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGCTGGGCCGGCCGGTCCGCCTCACGGCGAGAACCGACCGGCTCGACCCTTCTGC
TGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACAT
TAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAG
TCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCAAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGA
TGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCAGCGGGTGTTACTAATAGGACCCCGCTGGCACCTTATGAGAAATCAAAGT
CTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGTCCAGACATAGCAAGGATTGACAGACTGAG
AGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCT
AACTAGCTATGCGGAGCCATCCCTCCGTAGTTAGCTTCTTAGAGGGACTATGGTCGTTTAGGCCACAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC
TTAGATGTTCTGGGCCGCACGCGCGCTACACTAATGTATCCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATG
GGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGC
CCGTCGCTCCTACCGATTGAATGGTCTGGTGAAGTGTTCGGATCGCGGCGACGGGGGTGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTA
TCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGCCGTGACCCTTAAACAAAACAGACC