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Detailed information on CNT30114630


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU35|ERLL1_ARATH, E-value = 3e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376702Eutrema salsugineumArabidopsis thaliana44.4421.1581.62136forward
CNT30712062Eutrema salsugineumGlycine max33.9919.1281.73104forward
CNT30144779Eutrema salsugineumMedicago truncatula25.1612.1387.0177forward

Expression of CNT30114630

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MHTCIYSKYKILERKFCVRILYIADIVQAHSKPDGRFLSQTLRRTLRDIGTLRLIPRTLALRAVQRQTAASRSTKPWTTEQHR*

>peptide 2 (36 aa)
YLNNKFKQQPFNVACIHAFIQSIRFWKGNFACAFYT*

Sequence

>CNT30114630
TTACTTAAACAATAAATTTAAACAACAACCATTTAACGTTGCATGCATACATGCATTTATTCAAAGTATAAGATTTTGGAAAGGAAATTTTGCGTGCGCA
TTTTATACATAGCAGATATCGTTCAAGCGCACTCGAAACCAGATGGAAGGTTCTTGTCACAAACGTTGAGAAGAACACTGAGAGATATAGGAACATTAAG
GTTGATTCCGAGAACGTTAGCCCTAAGAGCAGTGCAAAGACAAACTGCAGCCTCAAGGTCAACCAAACCTTGGACAACCGAGCAGCATCGTTGAGCTGAT
GGCTGA