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Detailed information on CNT30114615


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528977Eutrema salsugineumEucalyptus grandis92.6667.8486.14909forward
CNT30546269Eutrema salsugineumIpomoea triloba83.7991.5482.97822forward
CNT30513419Eutrema salsugineumJuglans regia67.5877.4585.97663forward
CNT3044330Eutrema salsugineumPrunus dulcis91.1373.184.9894forward
CNT30635938Eutrema salsugineumCapsicum annuum92.7650.7283.96910forward
CNT3095105Eutrema salsugineumSolanum tuberosum92.7678.3184.95910forward
CNT30235198Eutrema salsugineumBrassica oleracea84.5175.584.68829forward
CNT30510145Eutrema salsugineumSolanum lycopersicum69.5247.8986.95682forward
CNT30608559Eutrema salsugineumGossypium raimondii90.3258.0683.07886forward
CNT30229037Eutrema salsugineumAnanas comosus88.9956.4784.19873forward
CNT30652285Eutrema salsugineumRosa chinensis91.3473.6284.6896forward
CNT30623089Eutrema salsugineumDaucus carota92.2552.484.09905forward
CNT30356895Eutrema salsugineumLactuca sativa87.8790.5584.45862forward
CNT30153569Eutrema salsugineumPrunus persica69.2275.2885.42679forward
CNT30410857Eutrema salsugineumPapaver somniferum92.6669.683.06909forward
CNT30704857Eutrema salsugineumPrunus avium92.6657.5784.93909forward
CNT30326890Eutrema salsugineumAsparagus officinalis92.6673.6682.62909forward
CNT30120658Eutrema salsugineumCitrus clementina92.6690.3683.61909forward
CNT30174646Eutrema salsugineumVigna angularis90.1184.8484.73884forward
CNT30334108Eutrema salsugineumCynara cardunculus91.7438.6483.89900forward

Expression of CNT30114615

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MKGRLLLDVVVRKSTAIFELLSGEDQPLLVWWDSLLVLDLSLHVVDGVRTLDLQSDRLSR*

>peptide 2 (60 aa)
MKGRLLLDVVVRKSTAIFELLSGEDQPLLVWWDSLLVLDLSLHVVDGVRTLDLQSDRLSR*

>peptide 3 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRSLRTK*

>peptide 4 (31 aa)
MVSELSTSKVMVFPVKVFTKICIPPRSLSTR*

>peptide 5 (87 aa)
MILEPTTKTEDQVKSRLLLDVVIGQGATILKLLAGEDQPLLVRGDTFLVLNFGFHVVDGVRALNLQSNGLSGQSFHEDLHTTTEPEH*

>peptide 6 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRSLRTK*

Sequence

>CNT30114615
CGCGAAGTCTTTAAAGAAAGGAAACAGAAACGACTTTTAAAACCAGAGACGCACGAAATATGATTCTAGAGCCCACCACGAAGACGGAGGACCAAGTGAA
GAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATACCTTC
CTTGTCTTGAATTTTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCAACCTCCAAAGTAATGGTCTTTCCGGTCAAAGTTTTCACGAAGATTTGCATA
CCACCACGGAGCCTGAGCACTAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTACGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCA
ACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAACTCTCGACCTCCAAAGTGATCGTCTTTCC
CGTTAGGGTTTTGACGAAGATCTGCATACCACCACGGAGCCTGAGGACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTACGGCCA
TCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAAC
TCTCGACCTCCAAAGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTG
GATGTTGTAATCGGCCAAAGTCCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCCTTCCTTATCCTGGATTTTG
GCTTTAACGTTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGC