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Detailed information on CNT30114189


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09X15|RR4_MORIN, E-value = 7e-126

BLAST vs NONCODE:
NONORUT000576, E-value = 7e-72

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618958Ficus caricaSesamum indicum25.7918.2387.61016forward
CNT3020650Ficus caricaCitrullus lanatus21.5548.7988.34849forward
CNT30730408Ficus caricaCorchorus capsularis11.2593.6690.29443forward
CNT30632297Ficus caricaVigna unguiculata19.2942.9986.32760forward
CNT30201080Ficus caricaPisum sativum14.2228.1390.71560forward
CNT3047566Ficus caricaPrunus dulcis22.3945.7292.86882forward
CNT3094383Ficus caricaSolanum tuberosum5.4610086.98215reverse complement
CNT30194121Ficus caricaSecale cereale11.5550.8488.57455forward
CNT30292655Ficus caricaTriticum aestivum12.1423.6484.52478forward
CNT30588877Ficus caricaMusa acuminata4.4263.7487.93174reverse complement
CNT30510912Ficus caricaSolanum lycopersicum6.02100.8589.45237forward
CNT30555988Ficus caricaOryza glaberrima3.8822.7783.66153forward
CNT30171250Ficus caricaTrifolium pratense2.4626.5893.8197forward
CNT30245953Ficus caricaAvena sativa2.1131.287.9583reverse complement
CNT30598583Ficus caricaFraxinus excelsior6.8527.1191.85270forward
CNT30445979Ficus caricaSaccharum spontaneum9.0490.5988.76356forward
CNT3017916Ficus caricaZea mays11.221.3988.44441forward
CNT30606803Ficus caricaGossypium raimondii4.663.9686.74181forward
CNT30232528Ficus caricaAnanas comosus11.6823.2490460forward
CNT30217417Ficus caricaKalanchoe fedtschenkoi9.882.4893.01386forward
CNT30655373Ficus caricaRosa chinensis26.1224.5889.51029forward
CNT30713835Ficus caricaMalus domestica golden5.8131.2486.46229reverse complement
CNT30627898Ficus caricaDaucus carota21.627.6588.72851forward
CNT30362312Ficus caricaSorghum bicolor2.3429.4993.4892reverse complement
CNT30595954Ficus caricaOryza meridionalis11.0433.1391.03435forward
CNT30360010Ficus caricaLactuca sativa5.8621.5187.01231forward
CNT30430934Ficus caricaPapaver somniferum25.6715.4886.751011forward
CNT3022800Ficus caricaPopulus trichocarpa8.6310088.53340forward
CNT30332506Ficus caricaDioscorea rotundata11.6350.2788.86458forward
CNT30149145Ficus caricaBrachypodium distachyon11.525.2288.3453forward
CNT30103542Ficus caricaOryza rufipogon9.0450.2189.33356forward
CNT30116859Ficus caricaOryza nivara7.2168.1189.79284forward
CNT30604206Ficus caricaOryza punctata4.9548.9988.72195forward

Expression of CNT30114189

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVIRVSKTQTRWMFVVPTILLSPDPDKEKG*

>peptide 2 (42 aa)
MLLIAIYQITMHTIIPTVIHMASLFLILISVVWIILERMDKE*

>peptide 3 (56 aa)
MNRYLIFIGLNILSHKIIFIPRQPRIRVWQRFSFIVKIECTHLSKNLNMNHYSFGL*

Sequence

>CNT30114189
TCCTCCTCTTTCCGGACAACACATACAAAGACAAAGAGACCCGCCAATAGTTAAGGAATTAGTGAACCTATGAGAGATGTTTAGACTTAGTTTTTTATCT
TCTACTTCTATCTACCATCTAACTATTTTCTTTAGTTATTCACTAGAGCAATTATGATCTGGAAGTCGATCCGGGGCAAGTGTTCGGATCTATTATGACA
TAGTCGTGAGGCGCTTAATGGACCTTTTTTTAATCTTATAAAACTTTTTCTGGGTTTTGAATTGATGCCAATTTATTTTTCGGTAACCTAGTCTATTCAT
ATCTCAATTTAAAGTTCCTAAAAAGAGCTACTTTATGTCTTACGTAGAACATATTACTATATACTCTATTCCAAACCGCGTGAACAGTCATTAGTCATTA
CTAAGAGACATTTTAGTATTTCTATTTAGTCATTCGAAGTTCTCTTTTATTAGTTTTAATTGCTGAAAAGAAATATATTTTTTATTTTATCTCTATATTG
TTTATCCCTACGAAATACTAGACGAAATAGAACGATTTTAGAAGGGATATAATGAAATTTTGTGATTGGGTTCTTCCTAGAGAAACGATTCGTTTTATTT
GACTGATCGATACAACAAACAATTAATTATAACAAATATATGATTATAAGAAATATAAAGATTCTAAACTTAAATTAAATAAATAATATTAAATTAAATA
TAAATAATATAATATTTATAGTAATTAATAAAATAAAAAAAAAAAAAGATATTATTATTCGAAACGCCTTGTGATCTTCAACCAATTCTGCGCTTCAATA
TAATTACCGGGAGTAAGCGCTAGAGCTTGTTTCCAATATTCGGCAGCTTGATCGAACCAAGCTTCCGCAATTTCAGAATCTCCTTGTCGAATGGCCTGTT
CTCCCCGGTCGGAATAGATCACGGCCATATTATTAAAAGCTTGTGGTAAGAATGGGTTTCGCTCTAGTGCACGAAAATAATATTCCAAAGCTTTCGTATG
TTCTCCGTTTCGTGTGTGGATAAGGCCTATGTTATAGAGTATATAACTTCGATCATAGGGATCAATTTCTAGTCGCATAGCTTCATAATAATTCTGTAAA
GCTTCTGCATAATTTCCTTCGGATTGAGCGGACATCCGTTACGGTCGTCATTCGATTTAAAGAATCTCCGTTTCAGAACCGTACATGAGATTTTCATCTC
ATACGGCTCCTCCTTTATGTACATAATCAGAATAATACATGGAATCAAAAAAGATTTAAATATTCTCATTATAAACTGAGCAGGGCTGGTGTTTTTACAA
AAAATCTCTAGCCAACCTTCTTGTAAAAGATCTTTCCTTAACATCTAGTATGTTGGTACTAGATAAAAAAAGTGACTCCAGTAATTTCTTTGTCTTAAAC
GCATCTTAATTTTCAGGAATAAGTCACTTCAACAGTCTTCGATGGTTATACGGGTATCCAAAACACAAACTAGATGGATGTTTGTTGTCCCAACCATTCT
TCTTAGTCCCGATCCTGATAAGGAAAAGGGATAATTTATAACAAAGTTTTCGTGTTGTTGATTCCTAGGAGTAGTGCCTCTTCCTCTATGCCTCCTATTG
GTACTAATGGAGTGAGTTTGACTTAACCCATACCATAGGTATAACCTTTCGCTCAATACTCTAGAATCGACAATTGAAGCATTTGAGGTTGCATTAATCG
GGGATACACGACAGAAGGGCTCGTTTTATTTACAAACTTCACCTTCAACAAGCGTAGATTTATTTCAATAATTTTTTTCTTTCTATCCCGAATAATAATG
TGTCTTCCTCCTAAGAAGACTAAGAGTGGTAAAAAATAAAAAAAAAAATATATATATAAATAAAATAAATAACTAAATTAAATTATAAAATAAATAAATA
AAAAATATAATAATCAAATCGCACCATCTCTGTAATAGGCAAATGCCTCTTTCTCGCCCAAAGTTGTCGGAATTATTCGTAATAAGATATTGGCTACAAT
TGAAAAGGTCTTATCAATAAAATTTCCATTTATTCGAGATCTAGACATAGGCAGAAAGTCATTCTATAATTTCTTTTAATTACCTTTTGTGAGAAAATAA
TCCCACAAACAACGGAATTTTACAATACGAAATAACATAAAAACACACTCAGTAAAATTAAACTTCGACTCAAATTGTTTCTTTTTGACAGGAATCAATA
AAAACTAAGAAATATTTGAAGCCGATTGGATTTCATCCAAATGTAAATTAAATTTTACATTTAAATCTAGTATTATAAGAATATAGGAAACTATTCTGAT
TTCATCAAAGTTGAAGAATGAACGAATTTATATCCTAATCTGTAGGATAATTCGAAAAGTTTTGATTGAATTATGATCCAAAGAGGAAAAAGAATCGAAT
AATCGTTCTATGATGGATGAAAATAGAATAACCGCCCGTTTTGTGTTGTGTATATAACGGATATACGCTATACAATCAAATATAAGGATTCCTGGGGCGT
TTCATGAATTTGGAATAAATCTATGGGGTAAGGGGTTATTGTTGAAAGATCTAAAATTGGAAAGTCATTTTAGAATTTTTATGAAAATAGAATAAGAGTC
TAAACTAAATATAATCATGATCTAAAGGTAGCCATTAAACATAGTCTAAAAAAATGGATCAATCGGTGGAGTCGTTCCAATTCAGGGATTTAATTCGGTA
TAAATATTCAAAAATAAAGTCGGGAGTGCCTTCTTTGTAAACATGAATAGATACCTTATATTTATTGGTTTAAATATTTTGTCTCACAAAATTATTTTTA
TCCCCCGCCAGCCTCGAATAAGGGTTTGGCAGCGTTTTTCTTTTATAGTTAAAATAGAGTGTACGCACCTATCCAAAAACCTAAATATGAATCACTATTC
ATTCGGTTTATGAACCATAATCATTATGCAGGAGAGATGGCCGAGTGGTTGAAGGCGTAGCATTGGAACTGCTATGTAGGCTTTTGTTTACCGAGGGTTC
GAATCCCTCTCTTTCCGTACCCTTCAACCTAATTCACCAATGTTATTGATCGCAATATATCAAATAACAATGCATACCATTATTCCAACAGTTATACATA
TGGCTTCTCTATTCCTAATCCTAATTTCTGTGGTATGGATTATACTGGAAAGAATGGACAAGGAATGAAGATCTCCCTATCAATCTATGATACATGAGTG
GGAAAAAATCCCCGGATAAAACGCCTTCCTGAGGGTCTCTTTATATCGGTGAAAGGAAGGGCAAAATTGTCCGAATCCTTCTTATTTTAGTTGTGTTTAA
GTCTGACGAGAATAATATTCTACAACTAGCAATTCATTTATTTTCAAACCGACGCATTTACTATCTATTATTTGATTGACTGATCCTTTATATTGGAATG
GGTGAAGAGTCAAATGTTTTGGCAATTCCTCAGGGGAGGATGAATCAAGATAATTTTGAACCAGAGACTTAGATTTTTGTTCATCTCTCACTGTAATAAT
ATCTCGGGGTTTGCATCGATAACTTGGTATATCTACTATACGACCATTAACTAAAATATGTCTATGATTAACCAATTGCCGGGCTTGAGGAATAGTTGAA
GCCATACCTAATCGAAAAAGGATGTTATCCAACCGCATTTCAAGTAATTGTAGTAAAACTTGACCTGTTGACCCTTTTGCTTTTCCGGCTATACGAACGT
ATTTAAGTAATTGTTGTTCTGTAAGACCATAATGAAAGCGCAATTTTTGTTTTTCTTCTAAACGAATACGATATTGAGATTTTTTACCGGGGCGTAATTG
ATTTCTAAGATCACTTACAGCTCTAGGTTTTTTACTAGTTAATCCCGGTAAAGCCCCCAAACGACGTATTTTTTTGAAACGAGGCCCTCTGTAACGCGAC
ATAAAGACTCCTTATAAAGTTTCATAAACCTAAATGAAA