Detailed information on CNT30114124


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FUB7|CHSY_HYPAN, E-value = 8e-148

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381108Ficus caricaManihot esculenta24.6550.7283.75283forward
CNT30628920Ficus caricaVigna unguiculata51.9286.3878.36596forward
CNT30486019Ficus caricaOlea europaea24.1347.8479.06277forward
CNT30171603Ficus caricaTrifolium pratense16.6436.2480.63191forward

Expression of CNT30114124

Peptides detected in this lncRNA

>peptide 1 (56 aa)
LALPLTTKILYFSLFSTFPHRNGNLSSIPKVPANDETRFHGENKAYYVIYELSARS*

>peptide 2 (99 aa)
MAPSLSGKIVCAADTNSNRGFSTSGVGSAPMIIAAAPSPNKACPTRLSRWVSLGPRKVTAVISEHTTSTRAPLLFSARSLARRSTVPPAKHPCWYIMSRL

>peptide 3 (43 aa)
MAGPPGCAIQKIEFQSEMPRGLNASVKDFSMFFEISPGTSLRR*

>peptide 4 (33 aa)
MNSTHALDMLPYSLSTCLVARSFSGFNPHLAST*

Sequence

>CNT30114124
CACTCGCATTGCCTTTAACAACAAAAATCCTATATTTCTCCTTGTTCTCAACGTTTCCACATCGAAATGGAAATCTCAGTAGTATTCCTAAAGTGCCTGC
AAACGATGAAACACGATTTCATGGAGAAAATAAAGCGTATTATGTGATATATGAACTATCTGCTAGGTCCTGATAGATGGATTATCAAAACCTGTTAACA
CAAATAAGTAACTGATATGAATACTTGATTCGTTTGACCAGCTAAATTAATTGCAATAGTTAACACAACACGAAATAGTTACAAACTTAAGATATTTGTG
ACTAAACATAAATATAGTGTATTTAATAAAGAATTGCTACGTTATTCCGTTTGGCTTTGCAAGTATGATGAGCAACACCAAATTTATCAAGAAACGAAAC
ACCAAAAAAAAATAATAAATAAATAAATTTGAGAAAACTCTAAATAGCAACACTGTGGAGCACCACGGTCTCAACACTGAGTCCAGGTCCAAAACCAAAC
AGAACTCCCCACTCGAGTCCTTCTCCGGTGGTCTTGACACCATCCTCGGCGCACTTCCTCCTCATCTCATCCAAAATGAACAGCACACATGCGCTAGACA
TGTTACCGTACTCGCTAAGCACGTGCCTTGTGGCGCGTAGTTTTTCAGGCTTCAACCCGCACTTGGCCTCTACTTGATCGAGAATGGCAGGCCCACCCGG
GTGTGCAATCCAGAAAATAGAGTTCCAATCTGAGATGCCAAGAGGTTTGAATGCTTCAGTTAAGGACTTCTCAATGTTCTTTGAAATAAGCCCAGGAACA
TCCTTGAGGAGGTGAAATGTAAGTCCGACTTCACGAAGATGCCCATCAATGGCCCCTTCACTATCGGGTAAGATTGTTTGTGCTGCGGACACCAATTCGA
ACAGGGGTTTTTCGACGTCGGGAGTAGGATCAGCCCCAATGATCATAGCAGCTGCACCATCACCAAATAAGGCTTGTCCAACAAGGCTGTCAAGATGGGT
GTCACTCGGACCACGGAAGGTAACAGCAGTGATCTCTGAACACACAACAAGCACACGGGCCCCTTTGTTGTTCTCCGCGAGGTCCTTGGCAAGGCGGAGT
ACCGTGCCACCGGCGAAGCACCCTTGTTGGTACATCATGAGCCGCTTG