Detailed information on CNT30114123


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FUB7|CHSY_HYPAN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195656Ficus caricaPisum sativum25.8936.6581.01416forward
CNT30507146Ficus caricaNicotiana attenuata20.2930.6480.37326forward
CNT3045136Ficus caricaPrunus dulcis33.3586.1783.02536forward
CNT30156272Ficus caricaPistacia vera45.6847.682.43734forward
CNT3096581Ficus caricaSolanum tuberosum26.2622.5981.04422forward
CNT30192407Ficus caricaSecale cereale23.2755.9978.61374forward
CNT3087878Ficus caricaVigna radiata25.8926.6281.01416forward
CNT30171320Ficus caricaTrifolium pratense18.7970.5681.13302forward
CNT30143557Ficus caricaMedicago truncatula15.8124.2683.86254forward
CNT30466546Ficus caricaSaccharum spontaneum13.0778.9580.48210forward
CNT30610101Ficus caricaGossypium raimondii56.1334.680.71902forward
CNT30151821Ficus caricaPrunus persica33.3593.0682.28536forward
CNT3022840Ficus caricaPopulus trichocarpa60.4999.7980.66972forward

Expression of CNT30114123

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKNRSPIMKSIFFHEGREHTRFSFRDAKIDVYKLFPKLILTFNFSIEEKY*

>peptide 2 (68 aa)
MSTPLVVQNTKWVIFDLGWPHSLMALVAASFPNFGTSTTTMSCLASNEGAMYAHTLGFSFRISSFKYM*

>peptide 3 (80 aa)
MMNSTHALDMFPYSLSTCLVARIFSGFKPHLASTWSRMAGPPGCAIQKIEFQSEIPRGLKASVKDFSTFFEISPGTSLSR*

>peptide 4 (94 aa)
MGFSTSGIGSAPTIRAAAPSPNRAWPTRLSRWVSLGPRKVTAVISEQTTRTRAPLLFSARSLARRSTVPPAKQPCWYIIRRLTDGRRPKSLVSW*

>peptide 5 (33 aa)
MMVTYIYIYRYIYIYISTEPSRLPRYGAQQSQL*

>peptide 6 (36 aa)
MKVPCTRTRWGFPLGSLHLSTCNAFLSWISRLQKRL*

>peptide 7 (42 aa)
MEHNSLNCEPRAKTKQHSPFESFSGGLESVRGTLPPHLVHDE*

>peptide 8 (43 aa)
MSIDRTLTVGEDCLGCRNQFKNGLLNLRNRICSDNQSSRTVTK*

Sequence

>CNT30114123
GTTATTCATTATTTATAATAAGTTGCTACATCAATCCCTTTGCTTTGATCAGTTGGTAGCGACCAGCAGGTAATTTAAACAAGACCCATTTGGGTAGAAT
TCCCCCCCATAGCTAAAGAAATAATACAAAGAAAAAAGAAAAAAGAAAATATTTTAAAAGAACCAAAACAAAGCACAATGATGGTAACATATATATATAT
ATATAGATATATATATATATATATATCCACCGAACCCTCTAGATTGCCACGCTATGGAGCACAACAGTCTCAACTGTGAGCCCAGGGCCAAAACCAAACA
GCACTCCCCATTCGAGTCCTTCTCCGGTGGTCTTGAGTCCGTCCGCGGCACACTTCCTCCTCATCTCGTCCATGATGAATAGCACACATGCGCTCGACAT
GTTTCCGTACTCGCTAAGCACGTGCCTCGTGGCGCGCATTTTTTCCGGCTTCAAACCACACTTGGCTTCTACTTGGTCAAGAATGGCTGGTCCACCTGGG
TGTGCGATCCAGAAAATAGAGTTCCAGTCTGAGATTCCCAGAGGTTTAAAGGCCTCTGTCAAGGACTTTTCAACATTCTTTGAAATAAGCCCGGGAACAT
CCTTGAGCAGGTGAAATGTAAGCCCAACTTCACGGAGATGTCCATCGATCGCACCCTCACTGTCGGGGAGGATTGTTTGGGCTGCCGAAACCAATTCAAA
AATGGGCTTCTCAACCTCCGGAATCGGATCTGCTCCGACAATCAGAGCAGCCGCACCGTCACCAAATAGGGCTTGGCCCACAAGACTGTCGAGGTGGGTG
TCGCTGGGTCCACGGAAGGTGACGGCTGTGATCTCTGAGCAGACGACGAGGACACGAGCCCCTTTGTTGTTCTCAGCGAGGTCCTTGGCAAGGCGGAGCA
CCGTGCCACCAGCAAAGCAACCCTGTTGGTACATCATAAGACGCTTGACGGATGGGCGGAGACCCAAGAGCTTAGTGAGTTGGTAGTCAGCCCCGGGCAT
GTCGACACCACTAGTGGTGCAAAACACCAAGTGGGTGATTTTTGACTTGGGCTGGCCCCATTCCTTGATGGCCTTAGTTGCAGCCTCTTTCCCCAATTTC
GGCACCTCTACCACCACCATGTCTTGCCTCGCATCCAATGAAGGTGCCATGTACGCGCACACGTTGGGGTTTTCCTTTAGGATCTCTTCATTTAAGTACA
TGTAACGCTTTTTTATCATGGATTTCTCGCCTGCAAAAACGTTTATAGCGGCAAAGAGAACGTTAGAGGAGTTGAGCTGTCATATCAATTAGCACTTCTC
ATATTTTGAACAATTAAGCTGTCTGTTAATTTTATGAAAAATAGGTCCCCGATAATGAAGTCAATTTTCTTTCATGAAGGAAGAGAACACACGAGATTCA
GCTTTAGGGATGCAAAAATAGATGTATATAAATTATTTCCAAAATTGATCTTGACATTCAATTTTAGTATAGAAGAGAAATATTAAAAAAACTAGCTCAT
CAAGCCACTAACGGACAACTGATTAGCAAAAACCATCCAATGTCACAAACATAACAAATAAAATTATATGTACGTGGTGTTCAATTTTGCTAGAGAATCA
ATAAAAT