Detailed information on CNT30114121


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FUB7|CHSY_HYPAN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628930Ficus caricaVigna unguiculata26.0535.8381.71421forward
CNT30192533Ficus caricaSecale cereale16.2739.3780.23263forward
CNT30646903Ficus caricaRosa chinensis38.7447.3583.23626forward
CNT30680228Ficus caricaTriticum urartu8.2928.3984.33134forward
CNT30355776Ficus caricaLactuca sativa17.7649.4882.58287forward
CNT30705527Ficus caricaPrunus avium16.4657.4586.47266forward
CNT30644974Ficus caricaCannabis sativa39.1178.780.7632forward

Expression of CNT30114121

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKNRSPIMKSIFFHEGREHTRFSFRDAKIDVYKLFPKLILTFNFSIEEKY*

>peptide 2 (51 aa)
MSTPLVVQKIKWVIFDLGWPHSLMALVAASFPNLGTSTTTISCLASNDGAM*

>peptide 3 (80 aa)
MMNSTHALDMFPYSLSTCLVARIFSGFKPHLASTWSRMAGPPGCAIQKIEFQSEIPRGLKASVKDFSTFFEISPGTSLSR*

>peptide 4 (94 aa)
MGFSTSGIGSAPTIRAAAPSPNRAWPTRLSRWVSLGPRKVTAVISEQTTRTRAPLLFSARSLARRSTVPPAKQPCWYIMRRLTDGRRPKSLVSW*

>peptide 5 (35 aa)
MVPCKHTGWGFPLGSLHLSTCNAFLSWISRLQKRL*

>peptide 6 (33 aa)
MMVTYIYIYRYIYIYISTEPSRLPRYGAQQSQL*

>peptide 7 (43 aa)
MSIDRTLTVGEDCLGCRNQFKNGLLNLRNRICSDNQSSRTVTK*

>peptide 8 (42 aa)
MEHNSLNCEPRAKTKQHSPFESFSGGLESVRGTLPPHLVHDE*

Sequence

>CNT30114121
GTTATTCATTATTTATAATAAGTTGCTACATCAATCCCTTTGCTTTGATCAGTTGGTAGCGACCAGCAGGTAATTTAAACAAGACCCATTTGGGTAGAAT
TCCCCCCCATAGCTAAAGAAATAATACAAAGAAAAAAGAAAAAAGAAAATATTTTAAAAGAACCAAAACAAAGCACAATGATGGTAACATATATATATAT
ATATAGATATATATATATATATATATCCACCGAACCCTCTAGATTGCCACGCTATGGAGCACAACAGTCTCAACTGTGAGCCCAGGGCCAAAACCAAACA
GCACTCCCCATTCGAGTCCTTCTCCGGTGGTCTTGAGTCCGTCCGCGGCACACTTCCTCCTCATCTCGTCCATGATGAATAGCACACATGCGCTCGACAT
GTTTCCGTACTCGCTAAGCACGTGCCTCGTGGCGCGCATTTTTTCCGGCTTCAAACCACACTTGGCTTCTACTTGGTCAAGAATGGCTGGTCCACCTGGG
TGTGCGATCCAGAAAATAGAGTTCCAGTCTGAGATTCCCAGAGGTTTAAAGGCCTCTGTCAAGGACTTTTCAACATTCTTTGAAATAAGCCCGGGAACAT
CCTTGAGCAGGTGAAATGTAAGCCCAACTTCACGGAGATGTCCATCGATCGCACCCTCACTGTCGGGGAGGATTGTTTGGGCTGCCGAAACCAATTCAAA
AATGGGCTTCTCAACCTCCGGAATCGGATCTGCTCCGACAATCAGAGCAGCCGCACCGTCACCAAATAGGGCTTGGCCCACAAGACTGTCGAGGTGGGTG
TCGCTGGGCCCACGGAAGGTGACGGCAGTGATCTCTGAGCAGACGACGAGGACACGAGCCCCTTTGTTGTTCTCAGCAAGGTCCTTGGCAAGGCGGAGCA
CCGTGCCACCGGCAAAGCAACCCTGTTGGTACATCATGAGGCGCTTGACGGATGGGCGGAGACCCAAGAGCTTAGTGAGTTGGTAGTCAGCCCCGGGCAT
GTCTACGCCGCTAGTGGTGCAAAAGATCAAGTGGGTGATTTTTGACTTGGGTTGGCCCCATTCCTTGATGGCCTTGGTGGCAGCCTCTTTTCCCAATTTG
GGTACCTCTACCACCACCATATCTTGTCTTGCATCCAACGATGGTGCCATGTAAGCACACAGGTTGGGGTTTTCCTTTAGGATCTCTTCATTTAAGTACA
TGTAACGCTTTTTTATCATGGATTTCTCGCCTGCAAAAACGTTTATAGCGGCAAAGAGAACGTTAGAGGAGTTGAGCTGTCATATCAATTAGCACTTCTC
ATATTTTGAACAATTAAGCTGTCTGTTAATTTTATGAAAAATAGGTCCCCGATAATGAAGTCAATTTTCTTTCATGAAGGAAGAGAACACACGAGATTCA
GCTTTAGGGATGCAAAAATAGATGTATATAAATTATTTCCAAAATTGATCTTGACATTCAATTTTAGTATAGAAGAGAAATATTAAAAAAACTAGCTCAT
CAAGCCACTAACGGACAACTGATTAGCAAAAACCATCCAATGTCACAAACATAACAAATAAAATTATATGTACGTGGTGTTCAATTTTGCTAGAGAATCA
ATAAAATAGATACTTA