Detailed information on CNT30114068


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3068454Ficus caricaLeersia perrieri7.3925.3784.62156forward

Expression of CNT30114068

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MISSPCSEHHCRFHVLRIYQFISAIRKKIF*

>peptide 2 (46 aa)
MLFSYITSFSPLCWFTFMADQKKRKLCKLKSTEEFFAVGKQPAVIR*

>peptide 3 (61 aa)
MKKNGEPVSLAVGEAIVLIYAFPFIILNFIYHNVIKKFNYKSTFFRKTWKTVIKCCLYHLK*

>peptide 4 (41 aa)
MKKKQLPCTGSRKGYARLIDDMTKAQAKNHHLELLFGPRHT*

>peptide 5 (48 aa)
MLNYNKVAAALFSLSLSLSLSLLIFFFYLVTFFLNVSLENETAIKSLF*

>peptide 6 (54 aa)
MDLLSFSLLLIEPFKIVCYSLILHHFPPFVGSHSWLIKRRGNFVNLNQLRNFLQ*

>peptide 7 (70 aa)
MLKAPPRGFHELEKYDEREDATSISPNNLRPEVGMDNTDEGFQFVIEICQMKPPPAWSQMEWTFYLFLCF*

>peptide 8 (69 aa)
MEDCHKVLPLSSQIKVKEDAVLKVLSPEKSGRITRVIHVPSISPSKALLIAMPIVSACPLISGARIKRP*

Sequence

>CNT30114068
TAAATCTAAATTGATCATAAATATCAAATACAATAACTAAAAAAAAAAATACGTACAAAAGCAAGATCTGCTTGACAAAACAAGAGAACTCCCCTCCTGA
AAAGCATTCAGTGCTTATTTCCCTCAAACCCCAAAATTTTTGTTCAAGCTTTGATGAACCTTAACACCCAAAAATTTCCCTAAAATTTTTCGCTCACCTA
TGATTTCTTCTCCCTGTTCTGAACACCATTGCCGTTTTCATGTGTTGAGAATCTATCAATTCATCTCTGCCATTAGAAAGAAAATTTTCTGAAGAAAAAT
CTCTCACTTCCTCCCTCATTCTATTTTTCCCTTTAATTTCTCCAAAACAAAATTGGATGCCGACCCCATCCTCTGTAACCAAGTTATGCATCTTCGTTAT
ATATGAAAGGGGAGAGATGAGTGTGGAATGAAAGCTCGTGGATCAGATCACCAAGAATAGGGCTAGTGGGCTAGTGTCTTATTACTGACAAGAGATTCAA
GGGAGCTACTAAGGAGTATATAGAAGAAGCTTGGAATTTCGTAAAGATGGCAGAGAAAGAAGCTGGTTATCCAGGAAATATATAATGTCCTTGCAAAGAT
TGTAGAAACTTGCGTCACCAATCTATTGATAGTGTTTTTGATCGCTTGGTCACAAATGGAATGGACCCAATACACACAGAGTGGTTTCATCATGGTACGT
TATGTTAAAGGCACCACCAAGAGGCTTCCATGAATTGGAAAAATATGATGAACGTGAAGATGCAACTTCAATATCTCCAAATAATCTAAGACCTGAAGTT
GGCATGGATAATACAGATGAAGGATTTCAATTTGTGATAGAGATTTGTCAAATGAAGCCTCCCCCCGCTTGGTCACAAATGGAATGGACCTTTTATCTTT
TTCTTTGCTTCTGATTGAACCATTCAAAATAGTATGTTATTCTCTTATATTACATCATTTTCCCCCCTTTGTTGGTTCACATTCATGGCTGATCAAAAGA
AGAGGAAACTTTGTAAACTTAAATCAACTGAGGAATTTTTTGCAGTAGGGAAGCAACCTGCAGTCATACGTTGAGCTATAACTAATCAAATATGTTGAAC
TATAACAAAGTTGCAGCAGCTCTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAATCTTTTTCTTCTATTTGGTAACATTTTTCCTGAACGTCT
CTCTTGAAAATGAGACTGCCATAAAAAGTCTGTTCTAAGCAGACGCTATTTCCCCGTTTCTGGATATACTCAGGTTGTACCAATTGTCTCTCTATTTCTA
TAAATAGTCACCATGGTTCTTTACTATTATTGTAGCACTCGTAAATAATCTGACAATAACTAGTTAACAAACAGTTTTATCTTTGTTTGTTTCTCATTTT
TTCATATGTAGTACATACTCAAATACACGTTTATTATTAGGCTAAAAGTGAAAAATTCAAAGCGATGAAGAAGAAACAACTCCCATGTACTGGCAGCCGC
AAAGGATATGCTCGTTTGATTGATGACATGACTAAAGCACAAGCAAAAAACCACCATCTAGAGTTGCTGTTTGGACCAAGGCACACATGAAGAAAAATGG
TGAACCTGTATCACTAGCAGTTGGTGAAGCTATTGTACTAATCTATGCCTTTCCCTTCATTATTTTAAATTTTATTTACCATAATGTTATCAAGAAATTC
AATTACAAATCTACATTCTTCAGGAAAACATGGAAGACTGTCATAAAGTGTTGCCTTTATCATCTCAAATAAAAGTAAAAGAGGACGCTGTTTTGAAAGT
TCTTAGTCCGGAAAAGAGTGGTCGAATTACGCGTGTGATACATGTTCCTTCTATTTCTCCAAGCAAAGCTCTTCTCATCGCAATGCCTATTGTATCGGCT
TGTCCTCTCATAAGTGGAGCCAGAATAAAGCGTCCATAATAAAGACGTTTACTGTCTGCTCTTGATTCAACACATTTCCACTGTAGTGGCCGAGTAGATA
CTGTTACTTTCTCTTGAACCATAGTATTATTCGATTAGAAAAAGCATGTAGAGAATTGAAAGAGCAAGTGGCAGCCAAACAAGGCTTAATAAATACTTTA
TTAAAAAATT